STRINGSTRING
kaiC kaiC alr1603 alr1603 fraC fraC hetR hetR alr3751 alr3751 alr5045 alr5045 alr5065 alr5065 alr5066 alr5066 alr2338 alr2338 alr2394 alr2394 nifB nifB all0980 all0980 alr0101 alr0101 alr0099 alr0099 alr0094 alr0094 alr0093 alr0093 mreB mreB mreC mreC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kaiCCircadian oscillation regulator; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. (519 aa)
alr1603Protein FraH; Putative heterocyst to vegetative cell connection. (289 aa)
fraCFilament integrity protein; Involved in filament integrity. Required for the integrity of cell junctions in general but is apparently not directly involved in normal differentiation and nitrogen fixation. (179 aa)
hetRHeterocyst differentiation protein; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity. Binds the promoter regions of hetR, hepA and patS. (299 aa)
alr3751Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (388 aa)
alr5045Penicillin-binding protein; ORF_ID:alr5045. (610 aa)
alr5065UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation; Belongs to the MurCDEF family. (494 aa)
alr5066UDP-N-acetylenolpyruvylglucosamine reductase; Cell wall formation. (331 aa)
alr2338ORF_ID:alr2338; hypothetical protein. (751 aa)
alr2394ORF_ID:alr2394; hypothetical protein. (267 aa)
nifBNitrogen fixation protein; Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. (475 aa)
all0980D-alanyl-D-alanine ligase; Cell wall formation. (364 aa)
alr0101ORF_ID:alr0101; unknown protein. (258 aa)
alr0099ORF_ID:alr0099; unknown protein. (326 aa)
alr0094Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (292 aa)
alr0093N-acetylmuramoyl-L-alanine amidase; ORF_ID:alr0093. (627 aa)
mreBRod shape-determining protein; ORF_ID:all0087; mreB gene product. (347 aa)
mreCRod shape-determining protein; ORF_ID:all0086; mreC gene product. (273 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
Server load: medium (54%) [HD]