Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| all1784 | all4008 | gene:10493802 | gene:10496051 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | 0.435 |
| all1784 | all4131 | gene:10493802 | gene:10496179 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Phosphoglycerate kinase; ORF_ID:all4131. | 0.690 |
| all1784 | alr4385 | gene:10493802 | gene:10496434 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.812 |
| all2564 | all4008 | gene:10494595 | gene:10496051 | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | 0.907 |
| all2564 | all4131 | gene:10494595 | gene:10496179 | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | Phosphoglycerate kinase; ORF_ID:all4131. | 0.898 |
| all2564 | alr1050 | gene:10494595 | gene:10493064 | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | 0.963 |
| all2564 | alr4385 | gene:10494595 | gene:10496434 | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.858 |
| all4008 | all1784 | gene:10496051 | gene:10493802 | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.435 |
| all4008 | all2564 | gene:10496051 | gene:10494595 | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | 0.907 |
| all4008 | all4131 | gene:10496051 | gene:10496179 | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | Phosphoglycerate kinase; ORF_ID:all4131. | 0.935 |
| all4008 | alr1050 | gene:10496051 | gene:10493064 | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | 0.999 |
| all4008 | alr4385 | gene:10496051 | gene:10496434 | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.911 |
| all4131 | all1784 | gene:10496179 | gene:10493802 | Phosphoglycerate kinase; ORF_ID:all4131. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.690 |
| all4131 | all2564 | gene:10496179 | gene:10494595 | Phosphoglycerate kinase; ORF_ID:all4131. | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | 0.898 |
| all4131 | all4008 | gene:10496179 | gene:10496051 | Phosphoglycerate kinase; ORF_ID:all4131. | Pyruvate kinase; ORF_ID:all4008; Belongs to the pyruvate kinase family. | 0.935 |
| all4131 | alr1050 | gene:10496179 | gene:10493064 | Phosphoglycerate kinase; ORF_ID:all4131. | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | 0.930 |
| all4131 | alr2350 | gene:10496179 | gene:10494379 | Phosphoglycerate kinase; ORF_ID:all4131. | Phosphoribulokinase; ORF_ID:alr2350. | 0.756 |
| all4131 | alr4385 | gene:10496179 | gene:10496434 | Phosphoglycerate kinase; ORF_ID:all4131. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.999 |
| all4131 | prk | gene:10496179 | gene:10496171 | Phosphoglycerate kinase; ORF_ID:all4131. | Phosphoribulokinase; ORF_ID:alr4123. | 0.767 |
| alr1050 | all2564 | gene:10493064 | gene:10494595 | Glucose-6-phosphate isomerase; ORF_ID:alr1050. | Pyruvate kinase; ORF_ID:all2564; Belongs to the pyruvate kinase family. | 0.963 |
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