40 items (Nostoc sp. PCC7120) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	all1914	Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. (1123 aa)
	all1846	Two-component hybrid sensor and regulator; ORF_ID:all1846. (680 aa)
	all0182	Two-component hybrid sensor and regulator; ORF_ID:all0182. (715 aa)
	all0219	ORF_ID:all0219; hypothetical protein. (585 aa)
	all0542	Two-component sensor histidine kinase; ORF_ID:all0542. (573 aa)
	all0729	Two-component hybrid sensor and regulator; ORF_ID:all0729. (1645 aa)
	all0824	Two-component hybrid sensor and regulator; ORF_ID:all0824. (1002 aa)
	all0978	Two-component hybrid sensor and regulator; ORF_ID:all0978. (1186 aa)
	all1012	Two-component response regulator; ORF_ID:all1012. (432 aa)
	all1145	Two-component sensor histidine kinase; ORF_ID:all1145. (641 aa)
	alr1229	Two-component sensor histidine kinase; ORF_ID:alr1229. (1749 aa)
	all1279	Two-component hybrid sensor and regulator; ORF_ID:all1279. (498 aa)
	all1280	Two-component sensor histidine kinase; ORF_ID:all1280. (941 aa)
	all1804	Two-component hybrid sensor and regulator; ORF_ID:all1804. (1287 aa)
	alr2481	Two-component sensor histidine kinase; ORF_ID:alr2481. (705 aa)
	all2897	Two-component hybrid sensor and regulator; ORF_ID:all2897. (646 aa)
	alr3092	Two-component hybrid sensor and regulator; ORF_ID:alr3092. (1290 aa)
	alr3120	Two-component hybrid sensor and regulator; ORF_ID:alr3120. (1286 aa)
	alr3170	ORF_ID:alr3170; hypothetical protein. (1021 aa)
	alr3225	Two-component sensor histidine kinase; ORF_ID:alr3225. (986 aa)
	all3767	Two-component sensor histidine kinase; ORF_ID:all3767. (463 aa)
	alr2428	Two-component hybrid sensor and regulator; ORF_ID:alr2428. (1627 aa)
	all2379	Two-component hybrid sensor and regulator; ORF_ID:all2379. (1344 aa)
	alr2279	Two-component hybrid sensor and regulator; ORF_ID:alr2279. (1299 aa)
	all2239	Two-component hybrid sensor and regulator; ORF_ID:all2239. (1707 aa)
	alr2137	Two-component sensor histidine kinase; ORF_ID:alr2137. (944 aa)
	alr2123	Two-component sensor histidine kinase; ORF_ID:alr2123. (460 aa)
	all2095	Two-component sensor histidine kinase; ORF_ID:all2095. (1654 aa)
	all2094	Two-component hybrid sensor and regulator; ORF_ID:all2094. (571 aa)
	alr1968	Two-component hybrid sensor and regulator; ORF_ID:alr1968. (759 aa)
	alr1966	Two-component sensor histidine kinase; ORF_ID:alr1966. (879 aa)
	alr3442	Two-component hybrid sensor and regulator; ORF_ID:alr3442. (865 aa)
	all3563	Two-component sensor histidine kinase; ORF_ID:all3563. (625 aa)
	alr3761	Two-component hybrid sensor and regulator; ORF_ID:alr3761. (1550 aa)
	all3985	Two-component hybrid sensor and regulator; ORF_ID:all3985. (614 aa)
	all5173	Two-component hybrid sensor and regulator; ORF_ID:all5173. (965 aa)
	all4097	Two-component hybrid sensor and regulator; ORF_ID:all4097. (965 aa)
	all5327	Two-component sensor histidine kinase; ORF_ID:all5327. (559 aa)
	all5210	Two-component hybrid sensor and regulator; ORF_ID:all5210. (1558 aa)
	all2875	Two-component hybrid sensor and regulator; ORF_ID:all2875. (1817 aa)

Your Current Organism:

Nostoc sp. PCC7120

NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
all0182	all0219	gene:10492189	gene:10492226	Two-component hybrid sensor and regulator; ORF_ID:all0182.	ORF_ID:all0219; hypothetical protein.	0.517
all0182	all0542	gene:10492189	gene:10492553	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component sensor histidine kinase; ORF_ID:all0542.	0.430
all0182	all0729	gene:10492189	gene:10492739	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all0729.	0.972
all0182	all0824	gene:10492189	gene:10492835	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all0824.	0.957
all0182	all0978	gene:10492189	gene:10492992	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all0978.	0.931
all0182	all1012	gene:10492189	gene:10493026	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component response regulator; ORF_ID:all1012.	0.889
all0182	all1145	gene:10492189	gene:10493159	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component sensor histidine kinase; ORF_ID:all1145.	0.814
all0182	all1279	gene:10492189	gene:10493293	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all1279.	0.597
all0182	all1280	gene:10492189	gene:10493294	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component sensor histidine kinase; ORF_ID:all1280.	0.621
all0182	all1804	gene:10492189	gene:10493822	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all1804.	0.857
all0182	all1846	gene:10492189	gene:10493865	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all1846.	0.477
all0182	all1914	gene:10492189	gene:10493933	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase.	0.941
all0182	all2094	gene:10492189	gene:10494123	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all2094.	0.572
all0182	all2095	gene:10492189	gene:10494124	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component sensor histidine kinase; ORF_ID:all2095.	0.558
all0182	all2239	gene:10492189	gene:10494268	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all2239.	0.789
all0182	all2379	gene:10492189	gene:10494409	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all2379.	0.947
all0182	all2875	gene:10492189	gene:10494909	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all2875.	0.973
all0182	all2897	gene:10492189	gene:10494932	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all2897.	0.926
all0182	all3767	gene:10492189	gene:10495809	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component sensor histidine kinase; ORF_ID:all3767.	0.935
all0182	all3985	gene:10492189	gene:10496027	Two-component hybrid sensor and regulator; ORF_ID:all0182.	Two-component hybrid sensor and regulator; ORF_ID:all3985.	0.850

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