STRINGSTRING
all5096 all5096 all2379 all2379 alr3120 alr3120 alr3813 alr3813 alr3900 alr3900 all3989 all3989 alr4891 alr4891 all1682 all1682 all2095 all2095 all5184 all5184 alr5216 alr5216 all1427 all1427 alr1229 alr1229 alr0765 alr0765 all1844 all1844 all1914 all1914 alr2079 alr2079
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
all5096ORF_ID:all5096; hypothetical protein. (436 aa)
all2379Two-component hybrid sensor and regulator; ORF_ID:all2379. (1344 aa)
alr3120Two-component hybrid sensor and regulator; ORF_ID:alr3120. (1286 aa)
alr3813ORF_ID:alr3813; hypothetical protein. (152 aa)
alr3900Zinc metalloprotease; ORF_ID:alr3900; hypothetical protein. (399 aa)
all3989polyA polymerase; ORF_ID:all3989; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (904 aa)
alr4891ORF_ID:alr4891; probable chloride channel protein. (871 aa)
all1682Magnesium transporter MgtE; Acts as a magnesium transporter. (465 aa)
all2095Two-component sensor histidine kinase; ORF_ID:all2095. (1654 aa)
all5184Mg2+ transport protein; Acts as a magnesium transporter. (466 aa)
alr5216ORF_ID:alr5216; probable hemolysin. (442 aa)
all1427ORF_ID:all1427; hypothetical protein. (197 aa)
alr1229Two-component sensor histidine kinase; ORF_ID:alr1229. (1749 aa)
alr0765ORF_ID:alr0765; hypothetical protein. (204 aa)
all1844Zinc metalloprotease; ORF_ID:all1844; hypothetical protein; Belongs to the peptidase M50B family. (389 aa)
all1914Histidine kinase; ORF_ID:all1914; similar to two-component sensor histidine kinase. (1123 aa)
alr2079ORF_ID:alr2079; similar to chloride channel. (586 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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