STRINGSTRING
ribD ribD alr0140 alr0140 alr0141 alr0141 trpG trpG alr0290 alr0290 alr0295 alr0295 alr0299 alr0299 all0328 all0328 aroF aroF alr1334 alr1334 alr1552 alr1552 alr1556 alr1556 ftsY ftsY alr1952 alr1952 all2011 all2011 all2012 all2012 asl2047 asl2047 alr2535 alr2535 alr2536 alr2536 alr2538 alr2538 alr2539 alr2539 alr2541 alr2541 alr3415 alr3415 alr3543 alr3543 alr3602 alr3602 alr3762 alr3762 alr3884 alr3884 asl4181 asl4181 secY secY alr4531 alr4531 alr4583 alr4583 all4778 all4778 secA secA all5003 all5003 secE secE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ribDRiboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (396 aa)
alr0140Periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; ORF_ID:alr0140. (552 aa)
alr0141Permease protein of oligopeptide ABC transporter; ORF_ID:alr0141. (341 aa)
trpGAnthranilate synthase component II; ORF_ID:all0269; trpG gene product. (184 aa)
alr0290ORF_ID:alr0290; similar to s-layer associated multidomain endoglucanase. (656 aa)
alr0295Transcriptional regulator; ORF_ID:alr0295. (232 aa)
alr0299Periplasmic polyamine-binding protein of ABC transporter; ORF_ID:alr0299. (388 aa)
all0328Anthranilate synthetase alpha-subunit; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high conc [...] (504 aa)
aroFPhospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (376 aa)
alr1334Permease protein of ABC transporter; ORF_ID:alr1334. (183 aa)
alr1552ATP-binding protein of ABC transporter; ORF_ID:alr1552; Belongs to the ABC transporter superfamily. (550 aa)
alr1556Permease protein of ABC transporter; ORF_ID:alr1556. (372 aa)
ftsYCell division protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (546 aa)
alr1952Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (490 aa)
all2011Permease protein of ABC transporter; ORF_ID:all2011. (313 aa)
all2012Permease protein of ABC transporter; ORF_ID:all2012. (335 aa)
asl2047ORF_ID:asl2047; hypothetical protein. (72 aa)
alr2535Branched-chain amino-acid ABC transport system periplasmic binding protein; ORF_ID:alr2535. (268 aa)
alr2536Permease protein of branched-chain amino acid ABC transporter; ORF_ID:alr2536; Belongs to the binding-protein-dependent transport system permease family. (316 aa)
alr2538Permease protein of branched-chain amino acid ABC transporter; ORF_ID:alr2538; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
alr2539ATP-binding protein of branched-chain amino acid ABC transporter; ORF_ID:alr2539. (259 aa)
alr2541ATP-binding protein of branched-chain amino acid ABC transporter; ORF_ID:alr2541. (264 aa)
alr3415Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (By similarity); Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily. (380 aa)
alr3543Protease; ORF_ID:alr3543. (615 aa)
alr3602ORF_ID:alr3602; probable long-chain-fatty-acid--CoA ligase. (683 aa)
alr3762Oligopeptide binding protein of ABC transporter; ORF_ID:alr3762. (588 aa)
alr3884Periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; ORF_ID:alr3884. (595 aa)
asl4181Protein-export membrane protein SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (77 aa)
secYPreprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (437 aa)
alr4531ORF_ID:alr4531; hypothetical protein. (1246 aa)
alr4583Permease protein of peptide ABC transporter; ORF_ID:alr4583. (345 aa)
all4778ABC transporter ATP-binding protein; ORF_ID:all4778; Belongs to the ABC transporter superfamily. (627 aa)
secAPreprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (930 aa)
all5003Permease protein of peptide ABC transporter; ORF_ID:all5003. (272 aa)
secESecretory protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (73 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.