STRINGSTRING
pyrR pyrR pyrB pyrB pyrC pyrC carA carA carB carB pyrF pyrF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrRUnannotated protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. (194 aa)
pyrBUnannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (322 aa)
pyrCUnannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (430 aa)
carAUnannotated protein; Belongs to the CarA family. (373 aa)
carBUnannotated protein; Belongs to the CarB family. (1116 aa)
pyrFUnannotated protein; Belongs to the OMP decarboxylase family. Type 2 subfamily. (274 aa)
Your Current Organism:
Mycobacterium colombiense
NCBI taxonomy Id: 1041522
Other names: M. colombiense CECT 3035, Mycobacterium colombiense 10B, Mycobacterium colombiense CECT 3035, Mycobacterium colombiense CIP 108962, Mycobacterium colombiense DSM 45105, Mycobacterium colombiense str. CECT 3035, Mycobacterium colombiense strain CECT 3035
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