STRINGSTRING
BAK48009.1 BAK48009.1 BAK48012.1 BAK48012.1 PorB PorB BAK48404.1 BAK48404.1 BAK48101.1 BAK48101.1 aroC aroC BAK48229.1 BAK48229.1 PheA PheA BAK48380.1 BAK48380.1 aroK-2 aroK-2 aroE aroE aroD aroD BAK46057.1 BAK46057.1 DapF DapF GltD GltD GltB GltB ArgE ArgE BAK46370.1 BAK46370.1 AbgB AbgB dapB dapB dapA dapA AvtA AvtA aroA aroA BAK46915.1 BAK46915.1 BAK46916.1 BAK46916.1 BAK47091.1 BAK47091.1 aroK aroK BAK47205.1 BAK47205.1 BAK47207.1 BAK47207.1 BAK47592.1 BAK47592.1 AroB AroB AbgB-2 AbgB-2 BAK47904.1 BAK47904.1 dapA-2 dapA-2 BAK48000.1 BAK48000.1 BAK48006.1 BAK48006.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAK48009.1Hypothetical protein. (424 aa)
BAK48012.1Related 2-oxoacid:ferredoxin oxidoreductase, delta subunit. (101 aa)
PorBRelated 2-oxoacid:ferredoxin oxidoreductase, beta subunit. (313 aa)
BAK48404.1Hypothetical protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (342 aa)
BAK48101.1Metal-dependent hydrolase of the beta-lactamase superfamily II. (280 aa)
aroCHypothetical protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (366 aa)
BAK48229.1Metal-dependent hydrolase of the beta-lactamase superfamily II. (259 aa)
PheAChorismate mutase. (287 aa)
BAK48380.1Hypothetical protein; Belongs to the aspartate-semialdehyde dehydrogenase family. (361 aa)
aroK-2Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (175 aa)
aroEHypothetical protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (289 aa)
aroDHypothetical protein; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (258 aa)
BAK46057.1Ferredoxin-like domain of glutamine synthase alpha chain. (91 aa)
DapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (280 aa)
GltDNADPH-dependent glutamate synthase beta chain; Related oxidoreductase. (493 aa)
GltBGlutamate synthase domain 2. (1531 aa)
ArgEAcetylornithine deacetylase; Succinyl-diaminopimelate desuccinylase and related deacylase. (459 aa)
BAK46370.1Hypothetical protein. (392 aa)
AbgBMetal-dependent amidase; Aminoacylase/carboxypeptidase. (377 aa)
dapBHypothetical protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (254 aa)
dapAHypothetical protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa)
AvtAPLP-dependent aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (405 aa)
aroAHypothetical protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (502 aa)
BAK46915.1Hypothetical protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (273 aa)
BAK46916.1Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (277 aa)
BAK47091.1Hypothetical protein. (245 aa)
aroKHypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (175 aa)
BAK47205.1Hypothetical protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (272 aa)
BAK47207.1Hypothetical protein; Belongs to the NadC/ModD family. (286 aa)
BAK47592.1Hypothetical protein. (245 aa)
AroB3-dehydroquinate synthetase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (371 aa)
AbgB-2Metal-dependent amidase/aminoacylase/carboxypeptidase. (475 aa)
BAK47904.1Hypothetical protein. (451 aa)
dapA-2Hypothetical protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa)
BAK48000.1Hypothetical protein; Belongs to the aspartokinase family. (437 aa)
BAK48006.1Hypothetical protein. (335 aa)
Your Current Organism:
Clostridium sp. SY8519
NCBI taxonomy Id: 1042156
Other names: C. sp. SY8519
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