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PaaJ PaaJ BAK47027.1 BAK47027.1 BAK47401.1 BAK47401.1 PaaJ-4 PaaJ-4 IspE IspE BAK47645.1 BAK47645.1 Idi Idi IspF IspF BAK48277.1 BAK48277.1 ispG ispG dxr dxr BAK48318.1 BAK48318.1 BAK48349.1 BAK48349.1 dxs dxs IspA IspA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PaaJacetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (431 aa)
BAK47027.1Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
BAK47401.1Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
PaaJ-4acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
IspE4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (290 aa)
BAK47645.1Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
IdiIsopentenyl-diphosphate isomerase. (176 aa)
IspF2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (180 aa)
BAK48277.1Hypothetical protein. (168 aa)
ispGHypothetical protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (348 aa)
dxrHypothetical protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (380 aa)
BAK48318.1Hypothetical protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (240 aa)
BAK48349.1Hypothetical protein; Belongs to the FPP/GGPP synthase family. (337 aa)
dxsHypothetical protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (621 aa)
IspAGeranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (295 aa)
Your Current Organism:
Clostridium sp. SY8519
NCBI taxonomy Id: 1042156
Other names: C. sp. SY8519
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