35 items (Trichoderma asperellum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2T3ZHH4	Uncharacterized protein. (1382 aa)
	A0A2T3ZIU2	DUF2013 domain-containing protein. (508 aa)
	A0A2T3ZJW3	Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
	A0A2T3ZJZ9	Uncharacterized protein. (373 aa)
	A0A2T3ZKC7	Uncharacterized protein. (1051 aa)
	A0A2T3ZLJ8	Profilin; Belongs to the profilin family. (130 aa)
	A0A2T3ZLL5	Uncharacterized protein. (269 aa)
	A0A2T3ZNE7	Uncharacterized protein. (427 aa)
	A0A2T3ZP53	Uncharacterized protein. (666 aa)
	A0A2T3ZPJ2	TNase-like domain-containing protein. (586 aa)
	A0A2T3ZQL8	Uncharacterized protein. (816 aa)
	A0A2T3ZF83	Uncharacterized protein. (268 aa)
	A0A2T3ZDZ6	TYR_PHOSPHATASE_2 domain-containing protein. (630 aa)
	A0A2T3ZDL5	Uncharacterized protein. (146 aa)
	A0A2T3ZBR2	Uncharacterized protein. (1779 aa)
	A0A2T3ZB76	Uncharacterized protein. (375 aa)
	A0A2T3ZAF5	MHD domain-containing protein. (886 aa)
	A0A2T3Z8L9	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (388 aa)
	A0A2T3Z5U5	Uncharacterized protein. (343 aa)
	A0A2T3Z5J0	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (192 aa)
	A0A2T3Z4Y2	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (202 aa)
	A0A2T3Z4N5	Uncharacterized protein. (1112 aa)
	A0A2T3Z420	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (363 aa)
	A0A2T3Z0T0	CRIB domain-containing protein. (778 aa)
	A0A2T3YZ25	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1223 aa)
	A0A2T3YXZ7	Uncharacterized protein. (410 aa)
	A0A2T3YXQ3	Uncharacterized protein. (195 aa)
	A0A2T3YW86	Uncharacterized protein. (187 aa)
	A0A2T3YW65	Uncharacterized protein; Belongs to the actin family. (439 aa)
	A0A2T3YVM3	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1687 aa)
	A0A2T3YVI4	Protein kinase domain-containing protein. (1037 aa)
	A0A2T3YT28	Uncharacterized protein. (210 aa)
	A0A2T3YSG6	Uncharacterized protein. (154 aa)
	A0A2T3ZFL0	Uncharacterized protein. (200 aa)
	A0A2T3ZG67	Uncharacterized protein. (194 aa)

Your Current Organism:

Trichoderma asperellum

NCBI taxonomy Id: 1042311
Other names: T. asperellum CBS 433.97, Trichoderma asperellum CBS 433.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T3YSG6	A0A2T3YT28	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3YVM3	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.672
A0A2T3YSG6	A0A2T3YW65	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.828
A0A2T3YSG6	A0A2T3YW86	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3YXQ3	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3Z0T0	Uncharacterized protein.	CRIB domain-containing protein.	0.867
A0A2T3YSG6	A0A2T3Z4N5	Uncharacterized protein.	Uncharacterized protein.	0.835
A0A2T3YSG6	A0A2T3Z5U5	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3Z8L9	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.864
A0A2T3YSG6	A0A2T3ZB76	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A2T3YSG6	A0A2T3ZBR2	Uncharacterized protein.	Uncharacterized protein.	0.703
A0A2T3YSG6	A0A2T3ZDL5	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A2T3YSG6	A0A2T3ZF83	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3ZFL0	Uncharacterized protein.	Uncharacterized protein.	0.669
A0A2T3YSG6	A0A2T3ZG67	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A2T3YSG6	A0A2T3ZLJ8	Uncharacterized protein.	Profilin; Belongs to the profilin family.	0.502
A0A2T3YSG6	A0A2T3ZLL5	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A2T3YSG6	A0A2T3ZP53	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A2T3YSG6	A0A2T3ZQL8	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A2T3YT28	A0A2T3YSG6	Uncharacterized protein.	Uncharacterized protein.	0.669