9 items (Trichoderma asperellum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2T3YT28	Uncharacterized protein. (210 aa)
	A0A2T3YVF3	Uncharacterized protein. (194 aa)
	A0A2T3YW86	Uncharacterized protein. (187 aa)
	A0A2T3YXQ3	Uncharacterized protein. (195 aa)
	A0A2T3Z5U5	Uncharacterized protein. (343 aa)
	A0A2T3ZF83	Uncharacterized protein. (268 aa)
	A0A2T3ZFL0	Uncharacterized protein. (200 aa)
	A0A2T3ZH76	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (628 aa)
	A0A2T3ZK40	Uncharacterized protein. (204 aa)

Your Current Organism:

Trichoderma asperellum

NCBI taxonomy Id: 1042311
Other names: T. asperellum CBS 433.97, Trichoderma asperellum CBS 433.97

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T3YT28	A0A2T3YVF3	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A2T3YT28	A0A2T3YXQ3	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A2T3YT28	A0A2T3ZF83	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A2T3YT28	A0A2T3ZFL0	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A2T3YT28	A0A2T3ZK40	Uncharacterized protein.	Uncharacterized protein.	0.775
A0A2T3YVF3	A0A2T3YT28	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A2T3YVF3	A0A2T3YW86	Uncharacterized protein.	Uncharacterized protein.	0.763
A0A2T3YVF3	A0A2T3YXQ3	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A2T3YVF3	A0A2T3Z5U5	Uncharacterized protein.	Uncharacterized protein.	0.763
A0A2T3YVF3	A0A2T3ZF83	Uncharacterized protein.	Uncharacterized protein.	0.771
A0A2T3YVF3	A0A2T3ZFL0	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A2T3YVF3	A0A2T3ZK40	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A2T3YW86	A0A2T3YVF3	Uncharacterized protein.	Uncharacterized protein.	0.763
A0A2T3YW86	A0A2T3YXQ3	Uncharacterized protein.	Uncharacterized protein.	0.816
A0A2T3YW86	A0A2T3ZF83	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A2T3YW86	A0A2T3ZK40	Uncharacterized protein.	Uncharacterized protein.	0.763
A0A2T3YXQ3	A0A2T3YT28	Uncharacterized protein.	Uncharacterized protein.	0.722
A0A2T3YXQ3	A0A2T3YVF3	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A2T3YXQ3	A0A2T3YW86	Uncharacterized protein.	Uncharacterized protein.	0.816
A0A2T3YXQ3	A0A2T3Z5U5	Uncharacterized protein.	Uncharacterized protein.	0.823