(24 nodes) Glycolysis network (Aureobasidium subglaciale)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A074YWN7	Phosphotransferase. (504 aa)
	A0A074YRX7	Uncharacterized protein. (78 aa)
	A0A074Z125	Triosephosphate isomerase. (257 aa)
	A0A074XYQ1	Glyceraldehyde-3-phosphate dehydrogenase. (362 aa)
	A0A074Y0G1	Glucosamine_iso domain-containing protein. (412 aa)
	A0A074Y1V9	Pyruvate kinase; Belongs to the pyruvate kinase family. (528 aa)
	A0A074Y2H3	Phosphotransferase. (522 aa)
	A0A074Y2Z9	Uncharacterized protein. (438 aa)
	A0A074Y5N2	6PF2K domain-containing protein. (461 aa)
	A0A074Y5U3	Uncharacterized protein. (344 aa)
	A0A074Y961	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (417 aa)
	A0A074YDI1	6PF2K domain-containing protein. (531 aa)
	A0A074YEG0	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (781 aa)
	A0A074YJU6	Uncharacterized protein. (258 aa)
	A0A074YM76	4-nitrophenylphosphatase. (302 aa)
	A0A074YMK3	Phosphotransferase. (298 aa)
	A0A074YRJ8	Uncharacterized protein. (233 aa)
	A0A074YP96	Phosphotransferase. (499 aa)
	A0A074YQ59	Uncharacterized protein; Belongs to the phosphohexose mutase family. (577 aa)
	A0A074YEP0	Triosephosphate isomerase. (248 aa)
	A0A074YHQ7	Uncharacterized protein. (165 aa)
	A0A074YIX5	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	A0A074ZJZ2	Glyceraldehyde-3-phosphate dehydrogenase. (337 aa)
	A0A074YYE2	6PF2K domain-containing protein. (468 aa)

Your Current Organism:

Aureobasidium subglaciale

NCBI taxonomy Id: 1043005
Other names: A. subglaciale EXF-2481, Aureobasidium pullulans var. subglaciale EXF-2481, Aureobasidium subglaciale EXF-2481

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A074XYQ1	A0A074Y0G1	Glyceraldehyde-3-phosphate dehydrogenase.	Glucosamine_iso domain-containing protein.	0.675
A0A074XYQ1	A0A074Y1V9	Glyceraldehyde-3-phosphate dehydrogenase.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.794
A0A074XYQ1	A0A074Y2Z9	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.951
A0A074XYQ1	A0A074Y5N2	Glyceraldehyde-3-phosphate dehydrogenase.	6PF2K domain-containing protein.	0.727
A0A074XYQ1	A0A074Y5U3	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.736
A0A074XYQ1	A0A074Y961	Glyceraldehyde-3-phosphate dehydrogenase.	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.	0.991
A0A074XYQ1	A0A074YDI1	Glyceraldehyde-3-phosphate dehydrogenase.	6PF2K domain-containing protein.	0.727
A0A074XYQ1	A0A074YEG0	Glyceraldehyde-3-phosphate dehydrogenase.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.777
A0A074XYQ1	A0A074YEP0	Glyceraldehyde-3-phosphate dehydrogenase.	Triosephosphate isomerase.	0.969
A0A074XYQ1	A0A074YIX5	Glyceraldehyde-3-phosphate dehydrogenase.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.946
A0A074XYQ1	A0A074YJU6	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.736
A0A074XYQ1	A0A074YQ59	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein; Belongs to the phosphohexose mutase family.	0.674
A0A074XYQ1	A0A074YRJ8	Glyceraldehyde-3-phosphate dehydrogenase.	Uncharacterized protein.	0.736
A0A074XYQ1	A0A074YYE2	Glyceraldehyde-3-phosphate dehydrogenase.	6PF2K domain-containing protein.	0.736
A0A074XYQ1	A0A074Z125	Glyceraldehyde-3-phosphate dehydrogenase.	Triosephosphate isomerase.	0.964
A0A074Y0G1	A0A074XYQ1	Glucosamine_iso domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.675
A0A074Y0G1	A0A074Y1V9	Glucosamine_iso domain-containing protein.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.546
A0A074Y0G1	A0A074Y2H3	Glucosamine_iso domain-containing protein.	Phosphotransferase.	0.838
A0A074Y0G1	A0A074Y2Z9	Glucosamine_iso domain-containing protein.	Uncharacterized protein.	0.631
A0A074Y0G1	A0A074Y5U3	Glucosamine_iso domain-containing protein.	Uncharacterized protein.	0.478