38 items (Camponotus floridanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EAG_01334	Transcription initiation factor TFIID subunit 3. (187 aa)
	EAG_02598	Transcription initiation factor TFIID subunit 9. (237 aa)
	EAG_01367	Transcription initiation factor TFIID subunit 11. (243 aa)
	EAG_01715	YEATS domain-containing protein 4. (227 aa)
	EAG_11970	Transcription initiation factor TFIID subunit 3. (34 aa)
	EAG_01645	General transcription factor IIH subunit. (401 aa)
	EAG_01623	DNA excision repair protein haywire. (805 aa)
	EAG_03317	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
	EAG_08471	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1799 aa)
	EAG_08474	Transcription initiation factor TFIID subunit 7. (396 aa)
	EAG_06889	General transcription factor IIH subunit 1. (559 aa)
	EAG_05577	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (317 aa)
	EAG_04139	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (547 aa)
	EAG_13699	Transcription initiation factor TFIID subunit 6. (636 aa)
	EAG_09887	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
	EAG_00809	Protein ENL. (737 aa)
	EAG_03801	Transcription initiation factor TFIID subunit 5. (1302 aa)
	EAG_01239	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
	EAG_14021	DNA-directed RNA polymerase II subunit RPB7. (249 aa)
	EAG_14202	Protein Dr1. (167 aa)
	EAG_04509	TFIIH basal transcription factor complex helicase subunit. (759 aa)
	EAG_13474	Transcription initiation factor TFIID subunit. (1912 aa)
	EAG_08858	Transcription initiation factor TFIID subunit 8. (291 aa)
	EAG_13247	TATA-box-binding protein. (252 aa)
	EAG_09700	DNA-directed RNA polymerase II 16 kDa polypeptide. (124 aa)
	EAG_04677	Transcription initiation factor IIB. (315 aa)
	EAG_03264	Transcription initiation factor IIA subunit 1. (373 aa)
	EAG_15323	General transcription factor IIE subunit 1. (420 aa)
	EAG_13888	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	EAG_13778	Transcription initiation factor TFIID subunit 6. (482 aa)
	EAG_04655	General transcription factor IIH subunit 5. (59 aa)
	EAG_14171	General transcription factor IIH subunit 3. (292 aa)
	EAG_06513	Transcription initiation factor TFIID subunit 12. (191 aa)
	EAG_03010	Transcription initiation factor TFIID subunit 10. (125 aa)
	EAG_10119	Transcription initiation factor TFIID subunit 2. (1192 aa)
	EAG_07398	Cyclin-H; Belongs to the cyclin family. (330 aa)
	EAG_16434	Transcription initiation factor TFIID subunit 4. (953 aa)
	EAG_15921	Transcription initiation factor TFIID subunit 13. (127 aa)

Your Current Organism:

Camponotus floridanus

NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAG_00809	EAG_01239	E2A6N2	E2A7R3	Protein ENL.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.678
EAG_00809	EAG_03010	E2A6N2	E2ARK6	Protein ENL.	Transcription initiation factor TFIID subunit 10.	0.412
EAG_00809	EAG_04677	E2A6N2	E2AFR1	Protein ENL.	Transcription initiation factor IIB.	0.761
EAG_00809	EAG_08474	E2A6N2	E1ZYY7	Protein ENL.	Transcription initiation factor TFIID subunit 7.	0.429
EAG_00809	EAG_08858	E2A6N2	E2ACF0	Protein ENL.	Transcription initiation factor TFIID subunit 8.	0.440
EAG_00809	EAG_10119	E2A6N2	E2AS08	Protein ENL.	Transcription initiation factor TFIID subunit 2.	0.503
EAG_00809	EAG_13247	E2A6N2	E2AEA3	Protein ENL.	TATA-box-binding protein.	0.524
EAG_00809	EAG_13474	E2A6N2	E2AC06	Protein ENL.	Transcription initiation factor TFIID subunit.	0.615
EAG_00809	EAG_13699	E2A6N2	E2A4W8	Protein ENL.	Transcription initiation factor TFIID subunit 6.	0.411
EAG_00809	EAG_13778	E2A6N2	E2AJY2	Protein ENL.	Transcription initiation factor TFIID subunit 6.	0.411
EAG_00809	EAG_14021	E2A6N2	E2A8N1	Protein ENL.	DNA-directed RNA polymerase II subunit RPB7.	0.425
EAG_00809	EAG_14202	E2A6N2	E2AA31	Protein ENL.	Protein Dr1.	0.438
EAG_01239	EAG_00809	E2A7R3	E2A6N2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Protein ENL.	0.678
EAG_01239	EAG_01334	E2A7R3	E2AT24	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription initiation factor TFIID subunit 3.	0.584
EAG_01239	EAG_01367	E2A7R3	E2AYW3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription initiation factor TFIID subunit 11.	0.875
EAG_01239	EAG_01623	E2A7R3	E2AW10	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA excision repair protein haywire.	0.975
EAG_01239	EAG_01645	E2A7R3	E2AW32	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	General transcription factor IIH subunit.	0.964
EAG_01239	EAG_01715	E2A7R3	E2AX80	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	YEATS domain-containing protein 4.	0.551
EAG_01239	EAG_02598	E2A7R3	E2AZI9	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription initiation factor TFIID subunit 9.	0.814
EAG_01239	EAG_03010	E2A7R3	E2ARK6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	Transcription initiation factor TFIID subunit 10.	0.869