STRINGSTRING
EAG_05643 EAG_05643 EAG_13350 EAG_13350 EAG_13690 EAG_13690 EAG_05499 EAG_05499 EAG_15996 EAG_15996 EAG_15627 EAG_15627 EAG_12540 EAG_12540 EAG_01953 EAG_01953 EAG_11322 EAG_11322 EAG_11394 EAG_11394 EAG_12501 EAG_12501 EAG_08447 EAG_08447 EAG_03072 EAG_03072 EAG_08566 EAG_08566 EAG_08564 EAG_08564 EAG_00883 EAG_00883 EAG_07718 EAG_07718 EAG_10606 EAG_10606 EAG_10876 EAG_10876 EAG_09187 EAG_09187 EAG_14549 EAG_14549 EAG_13766 EAG_13766 EAG_11000 EAG_11000 EAG_10996 EAG_10996 EAG_02436 EAG_02436 LSM5 LSM5 EAG_00960 EAG_00960 EAG_08768 EAG_08768 EAG_02116 EAG_02116 LSM4 LSM4 EAG_04328 EAG_04328 EAG_10747 EAG_10747 EAG_10267 EAG_10267 EAG_05289 EAG_05289 EAG_15118 EAG_15118 LSM3 LSM3 EAG_01724 EAG_01724 EAG_01743 EAG_01743 EAG_04068 EAG_04068 EAG_03768 EAG_03768 EAG_15486 EAG_15486 EAG_09132 EAG_09132 EAG_12066 EAG_12066 EAG_02348 EAG_02348 EAG_09022 EAG_09022 LSM8 LSM8 EAG_04988 EAG_04988 EAG_10317 EAG_10317 EAG_02710 EAG_02710 EAG_03494 EAG_03494 EAG_09325 EAG_09325 EAG_01105 EAG_01105 EAG_11541 EAG_11541 EAG_03353 EAG_03353 EAG_14304 EAG_14304 EAG_03804 EAG_03804 EAG_02509 EAG_02509 EAG_02508 EAG_02508 EAG_02484 EAG_02484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EAG_05643Putative U5 small nuclear ribonucleoprotein 200 kDa helicase. (2140 aa)
EAG_13350Small nuclear ribonucleoprotein Sm D3. (142 aa)
EAG_13690Protein HEXIM1. (407 aa)
EAG_05499Uncharacterized protein. (572 aa)
EAG_15996Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (84 aa)
EAG_15627Cisplatin resistance-associated overexpressed protein. (338 aa)
EAG_12540Death-inducer obliterator 1. (2322 aa)
EAG_01953Pre-mRNA branch site p14-like protein. (125 aa)
EAG_11322Small nuclear ribonucleoprotein-associated protein. (209 aa)
EAG_11394Putative RNA-binding protein Luc7-like 1. (305 aa)
EAG_12501Probable U2 small nuclear ribonucleoprotein A. (246 aa)
EAG_08447U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
EAG_03072116 kDa U5 small nuclear ribonucleoprotein component. (981 aa)
EAG_08566HIV Tat-specific factor 1-like protein. (260 aa)
EAG_08564HIV Tat-specific factor 1-like protein. (251 aa)
EAG_00883U1 small nuclear ribonucleoprotein A. (184 aa)
EAG_07718RNA-binding motif protein, X-linked 2. (88 aa)
EAG_10606Pre-mRNA-processing factor 39. (1028 aa)
EAG_10876Splicing factor 3B subunit 2. (703 aa)
EAG_09187Pre-mRNA-processing-splicing factor 8. (2372 aa)
EAG_14549Zinc finger matrin-type protein 5. (166 aa)
EAG_13766Uncharacterized protein C20orf4-like protein. (372 aa)
EAG_11000Small nuclear ribonucleoprotein Sm D2. (137 aa)
EAG_10996U6 snRNA-associated Sm-like protein LSm7. (111 aa)
EAG_02436Nucleolysin TIAR. (393 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
EAG_00960RNA-binding protein 40. (455 aa)
EAG_08768Splicing factor 3B subunit 3. (1201 aa)
EAG_02116Activating signal cointegrator 1 complex subunit 3. (2124 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
EAG_04328U4/U6 small nuclear ribonucleoprotein Prp31. (489 aa)
EAG_10747U4/U6 small nuclear ribonucleoprotein Prp4. (526 aa)
EAG_10267LIN1-like protein. (321 aa)
EAG_05289Splicing factor 3B subunit 4. (409 aa)
EAG_15118Heterogeneous nuclear ribonucleoprotein L. (274 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
EAG_01724Pre-mRNA-processing factor 6. (929 aa)
EAG_01743U7 snRNA-associated Sm-like protein LSm11. (116 aa)
EAG_04068U4/U6.U5 tri-snRNP-associated protein 1. (746 aa)
EAG_03768Splicing factor 3A subunit 2. (274 aa)
EAG_15486Splicing factor 3 subunit 1. (792 aa)
EAG_09132Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
EAG_12066Small nuclear ribonucleoprotein G. (76 aa)
EAG_02348PHD finger-like domain-containing protein 5A. (110 aa)
EAG_09022U1 small nuclear ribonucleoprotein 70 kDa. (409 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (85 aa)
EAG_04988Splicing factor 3A subunit 3. (500 aa)
EAG_10317Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
EAG_02710Zinc finger matrin-type protein 2. (197 aa)
EAG_03494Pre-mRNA-processing factor 40-like protein A. (834 aa)
EAG_09325U6 snRNA-associated Sm-like protein LSm2. (95 aa)
EAG_01105U4/U6 small nuclear ribonucleoprotein Prp3. (633 aa)
EAG_11541Splicing factor 3B subunit 1. (1267 aa)
EAG_03353Pre-mRNA-splicing factor 18. (335 aa)
EAG_14304WW domain-binding protein 4. (392 aa)
EAG_03804U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
EAG_0250913 kDa ribonucleoprotein-associated protein. (112 aa)
EAG_02508Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
EAG_02484U3 small nucleolar RNA-associated protein 18-like protein. (497 aa)
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.