STRINGSTRING
EAG_06680 EAG_06680 EAG_15486 EAG_15486 EAG_03768 EAG_03768 EAG_08447 EAG_08447 EAG_11394 EAG_11394 EAG_11322 EAG_11322 EAG_15627 EAG_15627 EAG_09022 EAG_09022 EAG_12066 EAG_12066 EAG_11541 EAG_11541 EAG_03494 EAG_03494 EAG_10996 EAG_10996 EAG_10606 EAG_10606 EAG_08654 EAG_08654
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EAG_06680Chitin-binding type-2 domain-containing protein. (98 aa)
EAG_15486Splicing factor 3 subunit 1. (792 aa)
EAG_03768Splicing factor 3A subunit 2. (274 aa)
EAG_08447U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
EAG_11394Putative RNA-binding protein Luc7-like 1. (305 aa)
EAG_11322Small nuclear ribonucleoprotein-associated protein. (209 aa)
EAG_15627Cisplatin resistance-associated overexpressed protein. (338 aa)
EAG_09022U1 small nuclear ribonucleoprotein 70 kDa. (409 aa)
EAG_12066Small nuclear ribonucleoprotein G. (76 aa)
EAG_11541Splicing factor 3B subunit 1. (1267 aa)
EAG_03494Pre-mRNA-processing factor 40-like protein A. (834 aa)
EAG_10996U6 snRNA-associated Sm-like protein LSm7. (111 aa)
EAG_10606Pre-mRNA-processing factor 39. (1028 aa)
EAG_08654U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (432 aa)
Your Current Organism:
Camponotus floridanus
NCBI taxonomy Id: 104421
Other names: C. floridanus, Camponotus floridana, Florida carpenter ant
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