STRINGSTRING
DSC_00210 DSC_00210 DSC_00215 DSC_00215 DSC_00220 DSC_00220 DSC_00230 DSC_00230 DSC_01640 DSC_01640 DSC_02265 DSC_02265 DSC_02830 DSC_02830 DSC_03855 DSC_03855 DSC_08945 DSC_08945 DSC_08960 DSC_08960 DSC_12680 DSC_12680 DSC_12960 DSC_12960 DSC_14820 DSC_14820 DSC_14825 DSC_14825 DSC_14830 DSC_14830
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSC_00210S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (276 aa)
DSC_00215COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)
DSC_00220COG1937 Uncharacterized protein conserved in bacteria. (91 aa)
DSC_00230Putative transmembrane protein; COG1814 Uncharacterized membrane protein. (312 aa)
DSC_01640COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (509 aa)
DSC_02265COG1064 Zn-dependent alcohol dehydrogenases. (361 aa)
DSC_02830COG1064 Zn-dependent alcohol dehydrogenases. (324 aa)
DSC_03855COG1064 Zn-dependent alcohol dehydrogenases. (339 aa)
DSC_08945COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (441 aa)
DSC_08960Alkane 1-monooxygenase. (267 aa)
DSC_12680Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases. (539 aa)
DSC_12960COG1254 Acylphosphatases. (89 aa)
DSC_14820Hypothetical protein. (34 aa)
DSC_14825COG1062 Zn-dependent alcohol dehydrogenases, class III. (374 aa)
DSC_14830Benzaldehyde dehydrogenase II; COG1012 NAD-dependent aldehyde dehydrogenases. (487 aa)
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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