STRINGSTRING
DSC_04965 DSC_04965 DSC_04970 DSC_04970 DSC_04975 DSC_04975 DSC_04980 DSC_04980 DSC_04985 DSC_04985
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSC_04965COG4972 Tfp pilus assembly protein, ATPase PilM. (352 aa)
DSC_04970COG3166 Tfp pilus assembly protein PilN. (235 aa)
DSC_04975COG3167 Tfp pilus assembly protein PilO. (222 aa)
DSC_04980COG3168 Tfp pilus assembly protein PilP. (178 aa)
DSC_04985Fimbrial assembly protein; COG4796 Type II secretory pathway, component HofQ. (615 aa)
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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