STRINGSTRING
DSC_04080 DSC_04080 DSC_04085 DSC_04085 DSC_04090 DSC_04090 DSC_04095 DSC_04095 DSC_04100 DSC_04100 DSC_04110 DSC_04110 DSC_04120 DSC_04120 DSC_04125 DSC_04125 DSC_04130 DSC_04130 DSC_04135 DSC_04135 DSC_04145 DSC_04145 DSC_04150 DSC_04150 DSC_04160 DSC_04160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSC_04080Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components. (963 aa)
DSC_04085Hypothetical protein. (143 aa)
DSC_04090Hypothetical protein. (480 aa)
DSC_04095Hypothetical protein. (298 aa)
DSC_04100Hypothetical protein. (226 aa)
DSC_04110Hypothetical protein. (121 aa)
DSC_04120Hypothetical protein. (123 aa)
DSC_04125Hypothetical protein. (249 aa)
DSC_04130Hypothetical protein. (723 aa)
DSC_04135Hypothetical protein. (181 aa)
DSC_04145Hypothetical protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (175 aa)
DSC_04150Hypothetical protein. (245 aa)
DSC_04160Hypothetical protein. (135 aa)
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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