STRINGSTRING
DSC_12625 DSC_12625 DSC_00685 DSC_00685 DSC_00785 DSC_00785 DSC_00965 DSC_00965 DSC_01115 DSC_01115 DSC_01210 DSC_01210 DSC_01410 DSC_01410 DSC_01510 DSC_01510 DSC_01635 DSC_01635 DSC_01930 DSC_01930 DSC_02390 DSC_02390 DSC_02735 DSC_02735 DSC_02820 DSC_02820 flgI flgI flgH flgH DSC_03285 DSC_03285 DSC_03330 DSC_03330 rlpA rlpA DSC_03345 DSC_03345 DSC_03390 DSC_03390 DSC_03420 DSC_03420 DSC_03455 DSC_03455 DSC_03555 DSC_03555 DSC_03645 DSC_03645 DSC_03740 DSC_03740 DSC_03895 DSC_03895 DSC_03945 DSC_03945 DSC_04330 DSC_04330 DSC_04485 DSC_04485 pal pal cpoB cpoB DSC_04985 DSC_04985 bamD bamD DSC_05110 DSC_05110 surA surA lptD lptD DSC_05760 DSC_05760 DSC_05775 DSC_05775 DSC_06305 DSC_06305 DSC_06380 DSC_06380 DSC_06570 DSC_06570 DSC_06635 DSC_06635 DSC_06935 DSC_06935 DSC_07720 DSC_07720 DSC_07815 DSC_07815 DSC_08335 DSC_08335 DSC_08540 DSC_08540 DSC_08550 DSC_08550 bamE bamE DSC_09010 DSC_09010 DSC_09295 DSC_09295 DSC_09390 DSC_09390 DSC_09655 DSC_09655 DSC_10215 DSC_10215 bamB bamB DSC_10310 DSC_10310 bamA bamA DSC_10950 DSC_10950 DSC_10955 DSC_10955 DSC_10965 DSC_10965 DSC_11005 DSC_11005 DSC_11270 DSC_11270 DSC_11275 DSC_11275 lptE lptE DSC_12320 DSC_12320 DSC_12515 DSC_12515 DSC_12575 DSC_12575 lolB lolB DSC_13160 DSC_13160 DSC_13230 DSC_13230 DSC_13770 DSC_13770 DSC_13905 DSC_13905 DSC_14085 DSC_14085 DSC_14225 DSC_14225 DSC_14355 DSC_14355 DSC_14875 DSC_14875 DSC_15300 DSC_15300 DSC_15375 DSC_15375 DSC_15405 DSC_15405 DSC_15625 DSC_15625
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSC_12625COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (359 aa)
DSC_00685Hypothetical protein. (431 aa)
DSC_00785COG1629 Outer membrane receptor proteins, mostly Fe transport. (740 aa)
DSC_00965COG0810 Periplasmic protein TonB, links inner and outer membranes. (365 aa)
DSC_01115COG1629 Outer membrane receptor proteins, mostly Fe transport. (868 aa)
DSC_01210Hypothetical protein; COG5463 Predicted integral membrane protein. (178 aa)
DSC_01410COG2503 Predicted secreted acid phosphatase. (289 aa)
DSC_01510COG0729 Outer membrane protein. (682 aa)
DSC_01635COG1629 Outer membrane receptor proteins, mostly Fe transport. (706 aa)
DSC_01930COG2951 Membrane-bound lytic murein transglycosylase B. (408 aa)
DSC_02390Hypothetical protein. (151 aa)
DSC_02735General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD. (758 aa)
DSC_02820COG3107 Putative lipoprotein. (461 aa)
flgIFlagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (370 aa)
flgHFlagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (264 aa)
DSC_03285COG3746 Phosphate-selective porin. (369 aa)
DSC_03330COG2951 Membrane-bound lytic murein transglycosylase B. (409 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (460 aa)
DSC_03345Hypothetical protein. (328 aa)
DSC_03390COG1629 Outer membrane receptor proteins, mostly Fe transport. (975 aa)
DSC_03420COG1629 Outer membrane receptor proteins, mostly Fe transport. (927 aa)
DSC_03455Hypothetical protein. (1047 aa)
DSC_03555TonB-dependent copper receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport. (669 aa)
DSC_03645Hypothetical protein. (80 aa)
DSC_03740COG3667 Uncharacterized protein involved in copper resistance. (342 aa)
DSC_03895COG1538 Outer membrane protein. (372 aa)
DSC_03945Putative cobalt-zinc-cadmium resistance protein. (421 aa)
DSC_04330COG1538 Outer membrane protein. (468 aa)
DSC_04485TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport. (821 aa)
palOuter membrane protein P6 precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (171 aa)
cpoBTol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (275 aa)
DSC_04985Fimbrial assembly protein; COG4796 Type II secretory pathway, component HofQ. (615 aa)
bamDCompetence lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (292 aa)
DSC_05110COG1629 Outer membrane receptor proteins, mostly Fe transport. (799 aa)
surAPutative survival protein SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (477 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (803 aa)
DSC_05760COG3656 Predicted periplasmic protein. (175 aa)
DSC_05775Catecholate siderophore receptor Fiu; COG4774 Outer membrane receptor for monomeric catechols. (795 aa)
DSC_06305Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (208 aa)
DSC_06380COG1629 Outer membrane receptor proteins, mostly Fe transport. (777 aa)
DSC_06570NodT family RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein. (491 aa)
DSC_06635TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport. (724 aa)
DSC_06935COG1629 Outer membrane receptor proteins, mostly Fe transport. (948 aa)
DSC_07720COG1538 Outer membrane protein. (505 aa)
DSC_07815COG1629 Outer membrane receptor proteins, mostly Fe transport. (1003 aa)
DSC_08335RND efflux system, outer membrane lipoprotein, NodT family; COG1538 Outer membrane protein. (493 aa)
DSC_08540OmpA family outer membrane lipoprotein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (223 aa)
DSC_08550Putative cation efflux system protein; COG1538 Outer membrane protein. (411 aa)
bamESmall membrane lipoprotein a (smpa); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (131 aa)
DSC_09010COG1629 Outer membrane receptor proteins, mostly Fe transport. (712 aa)
DSC_09295Periplasmic protein thiol/disulfide oxidoreductase DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins. (177 aa)
DSC_09390Aromatic hydrocarbon degradation membrane protein; COG2067 Long-chain fatty acid transport protein. (458 aa)
DSC_09655Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (390 aa)
DSC_10215Conjugal transfer protein TrbG/VirB9/CagX; COG3504 Type IV secretory pathway, VirB9 components. (334 aa)
bamBPutative quinoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (395 aa)
DSC_10310Fimbrial biogenesis protein; COG3063 Tfp pilus assembly protein PilF. (271 aa)
bamAOuter membrane antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (828 aa)
DSC_10950Hypothetical protein. (496 aa)
DSC_10955COG1629 Outer membrane receptor proteins, mostly Fe transport. (878 aa)
DSC_10965COG1450 Type II secretory pathway, component PulD. (696 aa)
DSC_11005General secretion pathway protein L; COG3297 Type II secretory pathway, component PulL. (369 aa)
DSC_11270Oar protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. (1016 aa)
DSC_11275Hypothetical protein; COG0457 FOG: TPR repeat. (522 aa)
lptERare lipoprotein b family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (173 aa)
DSC_12320TonB-dependent outer membrane receptor oar-like protein. (1079 aa)
DSC_12515COG1629 Outer membrane receptor proteins, mostly Fe transport. (689 aa)
DSC_12575COG4772 Outer membrane receptor for Fe3+-dicitrate. (769 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (213 aa)
DSC_13160COG0725 ABC-type molybdate transport system, periplasmic component. (260 aa)
DSC_13230COG3667 Uncharacterized protein involved in copper resistance. (378 aa)
DSC_13770COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1011 aa)
DSC_13905Hypothetical protein. (390 aa)
DSC_14085COG0793 Periplasmic protease; Belongs to the peptidase S41A family. (735 aa)
DSC_14225COG1629 Outer membrane receptor proteins, mostly Fe transport. (769 aa)
DSC_14355COG4771 Outer membrane receptor for ferrienterochelin and colicins. (628 aa)
DSC_14875COG3203 Outer membrane protein (porin). (310 aa)
DSC_15300COG1609 Transcriptional regulators. (349 aa)
DSC_15375COG0793 Periplasmic protease; Belongs to the peptidase S41A family. (517 aa)
DSC_15405COG2067 Long-chain fatty acid transport protein. (340 aa)
DSC_15625Putative TonB dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport. (969 aa)
Your Current Organism:
Pseudoxanthomonas spadix
NCBI taxonomy Id: 1045855
Other names: P. spadix BD-a59, Pseudoxanthomonas spadix BD-a59, Pseudoxanthomonas spadix str. BD-a59, Pseudoxanthomonas spadix strain BD-a59
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