STRINGSTRING
TC41_0059 TC41_0059 TC41_0060 TC41_0060 TC41_0081 TC41_0081 TC41_0086 TC41_0086 kdpE kdpE kdpD kdpD kdpA kdpA kdpB kdpB kdpC kdpC kdpD-2 kdpD-2 hydH hydH resE resE resD resD kinA kinA TC41_2076 TC41_2076 TC41_2077 TC41_2077 TC41_2078 TC41_2078 TC41_2079 TC41_2079 TC41_2080 TC41_2080 qseB qseB baeS baeS qseC qseC TC41_2544 TC41_2544 TC41_2633 TC41_2633 TC41_2634 TC41_2634 trpS trpS phoR phoR phoB phoB spo0F spo0F TC41_3249 TC41_3249
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TC41_0059Two component transcriptional regulator, winged helix family. (227 aa)
TC41_0060Histidine kinase. (369 aa)
TC41_0081PAS/PAC sensor signal transduction histidine kinase. (565 aa)
TC41_0086Histidine kinase. (651 aa)
kdpETwo component transcriptional regulator, winged helix family. (232 aa)
kdpDSensor kinase subunit kdpD. (487 aa)
kdpAPotassium-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. (562 aa)
kdpBK+-transporting ATPase, B subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. (683 aa)
kdpCPotassium-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. (203 aa)
kdpD-2Osmosensitive K channel His kinase sensor. (734 aa)
hydHHistidine kinase. (376 aa)
resEPAS/PAC sensor signal transduction histidine kinase. (645 aa)
resDTwo component transcriptional regulator, winged helix family. (233 aa)
kinAPAS/PAC sensor signal transduction histidine kinase. (494 aa)
TC41_2076Hypothetical protein. (479 aa)
TC41_2077NADH:flavin oxidoreductase/NADH oxidase. (340 aa)
TC41_2078Histidine kinase. (463 aa)
TC41_2079Two component transcriptional regulator, winged helix family. (224 aa)
TC41_2080Hypothetical protein. (134 aa)
qseBTwo component transcriptional regulator, winged helix family. (241 aa)
baeSHistidine kinase. (429 aa)
qseCIntegral membrane sensor signal transduction histidine kinase. (488 aa)
TC41_2544Two component transcriptional regulator, winged helix family. (221 aa)
TC41_2633Histidine kinase. (432 aa)
TC41_2634Two component transcriptional regulator, winged helix family. (226 aa)
trpStryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (330 aa)
phoRPAS/PAC sensor signal transduction histidine kinase. (429 aa)
phoBTwo component transcriptional regulator, winged helix family. (236 aa)
spo0FResponse regulator receiver protein. (125 aa)
TC41_3249Hypothetical protein. (96 aa)
Your Current Organism:
Alicyclobacillus acidocaldarius Tc41
NCBI taxonomy Id: 1048834
Other names: A. acidocaldarius subsp. acidocaldarius Tc-4-1, Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. Tc-4-1, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain Tc-4-1
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