STRINGSTRING
D7B24_003697 D7B24_003697 D7B24_004034 D7B24_004034 RPL38 RPL38 RPS29 RPS29 SIL1 SIL1 RPL35B RPL35B D7B24_002292 D7B24_002292 RPL15 RPL15 RPL35 RPL35 D7B24_001390 D7B24_001390 D7B24_002024 D7B24_002024 TEF1 TEF1 RPS16 RPS16 MBF1 MBF1 RRN7 RRN7 D7B24_002889 D7B24_002889 COX16 COX16 D7B24_002876 D7B24_002876 RPL7 RPL7 RPL2A RPL2A TEF3 TEF3 D7B24_001229 D7B24_001229 RPL9B RPL9B D7B24_001233 D7B24_001233 RPL8B RPL8B RPS27 RPS27 D7B24_001031 D7B24_001031 RPS13 RPS13 D7B24_002065 D7B24_002065 D7B24_009395 D7B24_009395 RPS14 RPS14 RPS28A_2 RPS28A_2 RPL22 RPL22 RPS2 RPS2 RPL12 RPL12 RPP0 RPP0 RPL31 RPL31 D7B24_009153 D7B24_009153 D7B24_009112 D7B24_009112 D7B24_008613 D7B24_008613 D7B24_008795 D7B24_008795 D7B24_008453 D7B24_008453 D7B24_007994 D7B24_007994 MEF1 MEF1 RPL26A RPL26A RPL34 RPL34 D7B24_009111 D7B24_009111 RPL20 RPL20 RPL29 RPL29 RPS3 RPS3 RPL39 RPL39 RPL17 RPL17 D7B24_006963 D7B24_006963 RPL44 RPL44 D7B24_008005 D7B24_008005 D7B24_007008 D7B24_007008 RPL10A RPL10A D7B24_006635 D7B24_006635 D7B24_006906 D7B24_006906 RPS17 RPS17 GNB2L1 GNB2L1 RPL16B RPL16B RPL30 RPL30 RPL5 RPL5 D7B24_005881 D7B24_005881 cnxG cnxG RPL3 RPL3 D7B24_005721 D7B24_005721 RPS19 RPS19 D7B24_006890 D7B24_006890 RPL13 RPL13 RPS5 RPS5 D7B24_006058 D7B24_006058 RPL28 RPL28 D7B24_007057 D7B24_007057 TIF11 TIF11 D7B24_005880 D7B24_005880 D7B24_006414 D7B24_006414 D7B24_005588 D7B24_005588 D7B24_005166 D7B24_005166 RPS25 RPS25 RPS28A_1 RPS28A_1 RPS8A RPS8A D7B24_005720 D7B24_005720 RPS15 RPS15 RPS20 RPS20 RPS0 RPS0 D7B24_004667 D7B24_004667 DOM34 DOM34 D7B24_002679 D7B24_002679 GRE2 GRE2 RPS18 RPS18 EFB1 EFB1 RPL11 RPL11 RPL32 RPL32 RPS21 RPS21 D7B24_000703 D7B24_000703 D7B24_005045 D7B24_005045 D7B24_004992 D7B24_004992 BTF3 BTF3 RPS4 RPS4 RPS26 RPS26 HBS1L HBS1L D7B24_005023 D7B24_005023 D7B24_005060 D7B24_005060 RPP2B RPP2B RPL37A RPL37A RPL36 RPL36 D7B24_003561 D7B24_003561 RPS23 RPS23 EGD2 EGD2 RPL24 RPL24 D7B24_005089 D7B24_005089
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7B24_003697FAD-binding PCMH-type domain-containing protein. (610 aa)
D7B24_004034S10_plectin domain-containing protein. (167 aa)
RPL3860S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
RPS2940S ribosomal protein S29. (56 aa)
SIL1Nucleotide exchange factor sil1. (209 aa)
RPL35B60S ribosomal protein L35B. (109 aa)
D7B24_002292S4 RNA-binding domain-containing protein. (211 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (337 aa)
RPL3560S ribosomal protein L35. (125 aa)
D7B24_001390Uncharacterized protein. (453 aa)
D7B24_002024TCTP domain-containing protein; Belongs to the TCTP family. (170 aa)
TEF1Translation elongation factor EF-1 alpha. (511 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
MBF1Multiprotein-bridging factor 1. (151 aa)
RRN7Pol I core factor CF. (299 aa)
D7B24_002889Uncharacterized protein. (222 aa)
COX16Cytochrome oxidase assembly. (113 aa)
D7B24_002876BZIP domain-containing protein. (276 aa)
RPL760S ribosomal protein L7. (262 aa)
RPL2A60S ribosomal protein L2A. (254 aa)
TEF3Translational elongation factor EF-1 alpha. (1052 aa)
D7B24_001229Uncharacterized protein. (186 aa)
RPL9B60S ribosomal protein L9B. (193 aa)
D7B24_001233Uncharacterized protein. (443 aa)
RPL8B60S ribosomal protein L8B. (261 aa)
RPS2740S ribosomal protein S27. (238 aa)
D7B24_001031Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (119 aa)
RPS13Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
D7B24_002065Uncharacterized protein. (332 aa)
D7B24_009395Epimerase domain-containing protein. (347 aa)
RPS14Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPS28A_240S ribosomal protein S28. (68 aa)
RPL2260S ribosomal protein L22. (126 aa)
RPS240S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
RPP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
RPL3160S ribosomal protein L31. (154 aa)
D7B24_009153Uncharacterized protein. (347 aa)
D7B24_009112Uncharacterized protein. (910 aa)
D7B24_008613Ribosomal_L28e domain-containing protein. (158 aa)
D7B24_00879540S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (64 aa)
D7B24_008453Tr-type G domain-containing protein. (763 aa)
D7B24_007994Epimerase domain-containing protein. (491 aa)
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (796 aa)
RPL26A60S ribosomal protein L26A. (136 aa)
RPL3460S ribosomal protein L34. (116 aa)
D7B24_009111Ribos_L4_asso_C domain-containing protein. (352 aa)
RPL2060S ribosomal protein L20. (174 aa)
RPL2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
RPL3960S ribosomal protein L39. (51 aa)
RPL1760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
D7B24_006963Uncharacterized protein. (535 aa)
RPL4440s ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
D7B24_008005Uncharacterized protein. (162 aa)
D7B24_00700840S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (63 aa)
RPL10ARibosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
D7B24_006635Uncharacterized protein. (476 aa)
D7B24_006906Uncharacterized protein. (277 aa)
RPS1740S ribosomal protein S17. (148 aa)
GNB2L1Guanine nucleotide-binding protein subunit beta-2-like 1. (316 aa)
RPL16B60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
RPL3060S ribosomal protein L30. (110 aa)
RPL560S ribosomal protein L5. (299 aa)
D7B24_005881BZIP domain-containing protein. (430 aa)
cnxGMolybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (95 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
D7B24_005721Uncharacterized protein. (303 aa)
RPS1940S ribosomal protein S19. (152 aa)
D7B24_006890Uncharacterized protein. (321 aa)
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
RPS5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (212 aa)
D7B24_00605840S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
RPL2860S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
D7B24_007057Uncharacterized protein. (407 aa)
TIF11Translation initiation factor 1A; Belongs to the eIF-1A family. (194 aa)
D7B24_005880HABP4_PAI-RBP1 domain-containing protein. (333 aa)
D7B24_006414Uncharacterized protein. (135 aa)
D7B24_005588Uncharacterized protein. (128 aa)
D7B24_005166Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
RPS28A_140S ribosomal protein S28. (68 aa)
RPS8A40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (207 aa)
D7B24_005720Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (203 aa)
RPS2040S ribosomal protein S20. (116 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
D7B24_004667Tr-type G domain-containing protein. (1009 aa)
DOM34Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (398 aa)
D7B24_00267960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
GRE2Methylglyoxal reductase (NADPH-dependent) gre2. (345 aa)
RPS18Ribosomal 40S subunit protein S18B. (228 aa)
EFB1Translation elongation factor 1 beta; Belongs to the EF-1-beta/EF-1-delta family. (229 aa)
RPL1160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
RPL3260S ribosomal protein L32. (131 aa)
RPS2140S ribosomal protein S21. (87 aa)
D7B24_000703Uncharacterized protein. (1100 aa)
D7B24_005045Uncharacterized protein. (280 aa)
D7B24_004992Uncharacterized protein. (160 aa)
BTF3Nascent polypeptide-associated complex subunit beta. (139 aa)
RPS440S ribosomal protein S4. (275 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
HBS1LHBS1-like protein. (803 aa)
D7B24_005023Epimerase domain-containing protein. (393 aa)
D7B24_005060Ribosomal_L14e domain-containing protein. (147 aa)
RPP2B60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
RPL37ARibosomal protein L37; Binds to the 23S rRNA. (97 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
D7B24_003561Uncharacterized protein. (387 aa)
RPS2340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)
EGD2GAL4 enhancer protein. (204 aa)
RPL2460S ribosomal protein L24. (175 aa)
D7B24_005089Myb-like domain-containing protein. (559 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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