62 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_003697	FAD-binding PCMH-type domain-containing protein. (610 aa)
	D7B24_004034	S10_plectin domain-containing protein. (167 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
	RPL35B	60S ribosomal protein L35B. (109 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (337 aa)
	RPL35	60S ribosomal protein L35. (125 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	RRN7	Pol I core factor CF. (299 aa)
	D7B24_002876	BZIP domain-containing protein. (276 aa)
	RPL7	60S ribosomal protein L7. (262 aa)
	RPL2A	60S ribosomal protein L2A. (254 aa)
	D7B24_001229	Uncharacterized protein. (186 aa)
	RPL9B	60S ribosomal protein L9B. (193 aa)
	RPL8B	60S ribosomal protein L8B. (261 aa)
	RPS27	40S ribosomal protein S27. (238 aa)
	RPS13	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPS14	Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	RPL22	60S ribosomal protein L22. (126 aa)
	RPS2	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	RPP0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	RPL31	60S ribosomal protein L31. (154 aa)
	D7B24_008613	Ribosomal_L28e domain-containing protein. (158 aa)
	RPL26A	60S ribosomal protein L26A. (136 aa)
	RPL34	60S ribosomal protein L34. (116 aa)
	D7B24_009111	Ribos_L4_asso_C domain-containing protein. (352 aa)
	RPL20	60S ribosomal protein L20. (174 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	RPL39	60S ribosomal protein L39. (51 aa)
	RPL17	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
	D7B24_006963	Uncharacterized protein. (535 aa)
	D7B24_008005	Uncharacterized protein. (162 aa)
	RPS17	40S ribosomal protein S17. (148 aa)
	GNB2L1	Guanine nucleotide-binding protein subunit beta-2-like 1. (316 aa)
	RPL16B	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	RPL30	60S ribosomal protein L30. (110 aa)
	RPL5	60S ribosomal protein L5. (299 aa)
	RPL3	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
	D7B24_005721	Uncharacterized protein. (303 aa)
	RPS19	40S ribosomal protein S19. (152 aa)
	RPL13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
	RPS5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (212 aa)
	D7B24_006058	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
	RPL28	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	D7B24_006414	Uncharacterized protein. (135 aa)
	D7B24_005166	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	RPS20	40S ribosomal protein S20. (116 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	D7B24_002679	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	RPS18	Ribosomal 40S subunit protein S18B. (228 aa)
	RPL11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
	RPL32	60S ribosomal protein L32. (131 aa)
	D7B24_004992	Uncharacterized protein. (160 aa)
	RPS4	40S ribosomal protein S4. (275 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
	D7B24_005060	Ribosomal_L14e domain-containing protein. (147 aa)
	RPP2B	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	RPL37A	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	RPS23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)
	RPL24	60S ribosomal protein L24. (175 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001229	D7B24_002679	A0A3M9Y1E1	A0A3M9YGW0	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.988
D7B24_001229	D7B24_002876	A0A3M9Y1E1	A0A3M9Y0Y3	Uncharacterized protein.	BZIP domain-containing protein.	0.988
D7B24_001229	D7B24_003697	A0A3M9Y1E1	A0A3M9XVW2	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.988
D7B24_001229	D7B24_004034	A0A3M9Y1E1	A0A3M9XWT1	Uncharacterized protein.	S10_plectin domain-containing protein.	0.979
D7B24_001229	D7B24_004992	A0A3M9Y1E1	A0A3M9YKH5	Uncharacterized protein.	Uncharacterized protein.	0.986
D7B24_001229	D7B24_005060	A0A3M9Y1E1	A0A3M9YLP2	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.990
D7B24_001229	D7B24_005166	A0A3M9Y1E1	A0A3M9YCM4	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.989
D7B24_001229	D7B24_005721	A0A3M9Y1E1	A0A3M9YB09	Uncharacterized protein.	Uncharacterized protein.	0.956
D7B24_001229	D7B24_006058	A0A3M9Y1E1	A0A3M9YBE8	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.951
D7B24_001229	D7B24_006414	A0A3M9Y1E1	A0A3M9YC53	Uncharacterized protein.	Uncharacterized protein.	0.991
D7B24_001229	D7B24_006963	A0A3M9Y1E1	A0A3M9Y895	Uncharacterized protein.	Uncharacterized protein.	0.986
D7B24_001229	D7B24_008005	A0A3M9Y1E1	A0A3M9Y8F9	Uncharacterized protein.	Uncharacterized protein.	0.986
D7B24_001229	D7B24_008613	A0A3M9Y1E1	A0A3M9Y4E3	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.984
D7B24_001229	D7B24_009111	A0A3M9Y1E1	A0A3M9Y752	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.980
D7B24_001229	GNB2L1	A0A3M9Y1E1	A0A3M9Y958	Uncharacterized protein.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.976
D7B24_001229	RPL11	A0A3M9Y1E1	A0A3M9YIE0	Uncharacterized protein.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.989
D7B24_001229	RPL12	A0A3M9Y1E1	A0A3M9Y3B4	Uncharacterized protein.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.977
D7B24_001229	RPL13	A0A3M9Y1E1	A0A3M9YB68	Uncharacterized protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.992
D7B24_001229	RPL15	A0A3M9Y1E1	A0A3M9XZ43	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.985
D7B24_001229	RPL16B	A0A3M9Y1E1	A0A3M9Y9J8	Uncharacterized protein.	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family.	0.987