STRINGSTRING
D7B24_003697 D7B24_003697 D7B24_004034 D7B24_004034 RPL38 RPL38 RPL35B RPL35B RPL15 RPL15 RPL35 RPL35 RPS16 RPS16 RRN7 RRN7 D7B24_002876 D7B24_002876 RPL7 RPL7 RPL2A RPL2A RPL9B RPL9B RPL8B RPL8B RPS27 RPS27 RPS13 RPS13 RPS14 RPS14 RPL22 RPL22 RPS2 RPS2 RPL12 RPL12 RPP0 RPP0 RPL31 RPL31 D7B24_008613 D7B24_008613 RPL26A RPL26A RPL34 RPL34 RPL20 RPL20 RPL29 RPL29 RPL39 RPL39 RPL17 RPL17 D7B24_006963 D7B24_006963 D7B24_008005 D7B24_008005 RPS17 RPS17 GNB2L1 GNB2L1 RPL16B RPL16B RPL30 RPL30 RPL5 RPL5 RPL3 RPL3 RPS19 RPS19 RPL13 RPL13 RPS5 RPS5 D7B24_006058 D7B24_006058 RPL28 RPL28 D7B24_006414 D7B24_006414 RPS25 RPS25 RPS20 RPS20 RPS0 RPS0 D7B24_002679 D7B24_002679 RPS18 RPS18 RPL11 RPL11 RPL32 RPL32 D7B24_004992 D7B24_004992 RPS4 RPS4 RPS26 RPS26 D7B24_005060 D7B24_005060 RPL37A RPL37A RPL36 RPL36 RPS23 RPS23 RPL24 RPL24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7B24_003697FAD-binding PCMH-type domain-containing protein. (610 aa)
D7B24_004034S10_plectin domain-containing protein. (167 aa)
RPL3860S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
RPL35B60S ribosomal protein L35B. (109 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (337 aa)
RPL3560S ribosomal protein L35. (125 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
RRN7Pol I core factor CF. (299 aa)
D7B24_002876BZIP domain-containing protein. (276 aa)
RPL760S ribosomal protein L7. (262 aa)
RPL2A60S ribosomal protein L2A. (254 aa)
RPL9B60S ribosomal protein L9B. (193 aa)
RPL8B60S ribosomal protein L8B. (261 aa)
RPS2740S ribosomal protein S27. (238 aa)
RPS13Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
RPS14Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPL2260S ribosomal protein L22. (126 aa)
RPS240S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
RPP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
RPL3160S ribosomal protein L31. (154 aa)
D7B24_008613Ribosomal_L28e domain-containing protein. (158 aa)
RPL26A60S ribosomal protein L26A. (136 aa)
RPL3460S ribosomal protein L34. (116 aa)
RPL2060S ribosomal protein L20. (174 aa)
RPL2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
RPL3960S ribosomal protein L39. (51 aa)
RPL1760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
D7B24_006963Uncharacterized protein. (535 aa)
D7B24_008005Uncharacterized protein. (162 aa)
RPS1740S ribosomal protein S17. (148 aa)
GNB2L1Guanine nucleotide-binding protein subunit beta-2-like 1. (316 aa)
RPL16B60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
RPL3060S ribosomal protein L30. (110 aa)
RPL560S ribosomal protein L5. (299 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
RPS1940S ribosomal protein S19. (152 aa)
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
RPS5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (212 aa)
D7B24_00605840S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
RPL2860S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
D7B24_006414Uncharacterized protein. (135 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
RPS2040S ribosomal protein S20. (116 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
D7B24_00267960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
RPS18Ribosomal 40S subunit protein S18B. (228 aa)
RPL1160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
RPL3260S ribosomal protein L32. (131 aa)
D7B24_004992Uncharacterized protein. (160 aa)
RPS440S ribosomal protein S4. (275 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
D7B24_005060Ribosomal_L14e domain-containing protein. (147 aa)
RPL37ARibosomal protein L37; Binds to the 23S rRNA. (97 aa)
RPL3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
RPS2340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)
RPL2460S ribosomal protein L24. (175 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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