STRINGSTRING
D7B24_003697 D7B24_003697 RPL15 RPL15 RPL35 RPL35 D7B24_002876 D7B24_002876 RPL7 RPL7 RPL2A RPL2A RPL9B RPL9B RPL8B RPL8B RPL12 RPL12 RPP0 RPP0 D7B24_008613 D7B24_008613 RPL34 RPL34 RPL20 RPL20 RPL29 RPL29 RPL17 RPL17 RPL16B RPL16B RPL30 RPL30 RPL3 RPL3 RPL13 RPL13 RPL28 RPL28 D7B24_002679 D7B24_002679 RPL11 RPL11 RPL32 RPL32 D7B24_004992 D7B24_004992 RPL24 RPL24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7B24_003697FAD-binding PCMH-type domain-containing protein. (610 aa)
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (337 aa)
RPL3560S ribosomal protein L35. (125 aa)
D7B24_002876BZIP domain-containing protein. (276 aa)
RPL760S ribosomal protein L7. (262 aa)
RPL2A60S ribosomal protein L2A. (254 aa)
RPL9B60S ribosomal protein L9B. (193 aa)
RPL8B60S ribosomal protein L8B. (261 aa)
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
RPP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
D7B24_008613Ribosomal_L28e domain-containing protein. (158 aa)
RPL3460S ribosomal protein L34. (116 aa)
RPL2060S ribosomal protein L20. (174 aa)
RPL2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
RPL1760S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
RPL16B60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
RPL3060S ribosomal protein L30. (110 aa)
RPL360S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
RPL1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
RPL2860S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
D7B24_00267960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
RPL1160S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
RPL3260S ribosomal protein L32. (131 aa)
D7B24_004992Uncharacterized protein. (160 aa)
RPL2460S ribosomal protein L24. (175 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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