14 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_003697	FAD-binding PCMH-type domain-containing protein. (610 aa)
	RPL35	60S ribosomal protein L35. (125 aa)
	D7B24_002876	BZIP domain-containing protein. (276 aa)
	RPL2A	60S ribosomal protein L2A. (254 aa)
	RPL8B	60S ribosomal protein L8B. (261 aa)
	RPL34	60S ribosomal protein L34. (116 aa)
	RPL20	60S ribosomal protein L20. (174 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	RPL16B	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	RPL30	60S ribosomal protein L30. (110 aa)
	RPL28	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	D7B24_002679	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	RPL11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
	RPL24	60S ribosomal protein L24. (175 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_002679	D7B24_002876	A0A3M9YGW0	A0A3M9Y0Y3	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	BZIP domain-containing protein.	0.999
D7B24_002679	D7B24_003697	A0A3M9YGW0	A0A3M9XVW2	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	FAD-binding PCMH-type domain-containing protein.	0.999
D7B24_002679	RPL11	A0A3M9YGW0	A0A3M9YIE0	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
D7B24_002679	RPL16B	A0A3M9YGW0	A0A3M9Y9J8	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family.	0.999
D7B24_002679	RPL20	A0A3M9YGW0	A0A3M9Y761	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L20.	0.999
D7B24_002679	RPL24	A0A3M9YGW0	A0A3M9YPH0	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L24.	0.999
D7B24_002679	RPL28	A0A3M9YGW0	A0A3M9YBX5	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.	0.999
D7B24_002679	RPL29	A0A3M9YGW0	A0A3M9Y826	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
D7B24_002679	RPL2A	A0A3M9YGW0	A0A3M9Y156	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L2A.	0.999
D7B24_002679	RPL30	A0A3M9YGW0	A0A3M9Y9R1	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L30.	0.999
D7B24_002679	RPL34	A0A3M9YGW0	A0A3M9Y6Y8	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L34.	0.999
D7B24_002679	RPL35	A0A3M9YGW0	A0A3M9XZD1	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L35.	0.999
D7B24_002679	RPL8B	A0A3M9YGW0	A0A3M9Y235	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L8B.	0.999
D7B24_002876	D7B24_002679	A0A3M9Y0Y3	A0A3M9YGW0	BZIP domain-containing protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
D7B24_002876	D7B24_003697	A0A3M9Y0Y3	A0A3M9XVW2	BZIP domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.999
D7B24_002876	RPL11	A0A3M9Y0Y3	A0A3M9YIE0	BZIP domain-containing protein.	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
D7B24_002876	RPL16B	A0A3M9Y0Y3	A0A3M9Y9J8	BZIP domain-containing protein.	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family.	0.999
D7B24_002876	RPL20	A0A3M9Y0Y3	A0A3M9Y761	BZIP domain-containing protein.	60S ribosomal protein L20.	0.999
D7B24_002876	RPL24	A0A3M9Y0Y3	A0A3M9YPH0	BZIP domain-containing protein.	60S ribosomal protein L24.	0.999
D7B24_002876	RPL28	A0A3M9Y0Y3	A0A3M9YBX5	BZIP domain-containing protein.	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family.	0.999