17 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_004034	S10_plectin domain-containing protein. (167 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	RRN7	Pol I core factor CF. (299 aa)
	RPS27	40S ribosomal protein S27. (238 aa)
	RPS13	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPS14	Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	RPS2	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	D7B24_008005	Uncharacterized protein. (162 aa)
	RPS17	40S ribosomal protein S17. (148 aa)
	RPL5	60S ribosomal protein L5. (299 aa)
	RPS19	40S ribosomal protein S19. (152 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	RPS18	Ribosomal 40S subunit protein S18B. (228 aa)
	RPS4	40S ribosomal protein S4. (275 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
	RPS23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_004034	D7B24_008005	A0A3M9XWT1	A0A3M9Y8F9	S10_plectin domain-containing protein.	Uncharacterized protein.	0.999
D7B24_004034	RPL5	A0A3M9XWT1	A0A3M9YAH6	S10_plectin domain-containing protein.	60S ribosomal protein L5.	0.999
D7B24_004034	RPS0	A0A3M9XWT1	A0A3M9YFG5	S10_plectin domain-containing protein.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
D7B24_004034	RPS13	A0A3M9XWT1	A0A3M9Y2B8	S10_plectin domain-containing protein.	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
D7B24_004034	RPS14	A0A3M9XWT1	A0A3M9Y2U3	S10_plectin domain-containing protein.	Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family.	0.999
D7B24_004034	RPS16	A0A3M9XWT1	A0A3M9XZZ9	S10_plectin domain-containing protein.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
D7B24_004034	RPS17	A0A3M9XWT1	A0A3M9Y947	S10_plectin domain-containing protein.	40S ribosomal protein S17.	0.999
D7B24_004034	RPS18	A0A3M9XWT1	A0A3M9YH62	S10_plectin domain-containing protein.	Ribosomal 40S subunit protein S18B.	0.999
D7B24_004034	RPS19	A0A3M9XWT1	A0A3M9YB42	S10_plectin domain-containing protein.	40S ribosomal protein S19.	0.999
D7B24_004034	RPS2	A0A3M9XWT1	A0A3M9Y3A6	S10_plectin domain-containing protein.	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family.	0.999
D7B24_004034	RPS23	A0A3M9XWT1	A0A3M9YNF5	S10_plectin domain-containing protein.	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.999
D7B24_004034	RPS25	A0A3M9XWT1	A0A3M9YD01	S10_plectin domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
D7B24_004034	RPS26	A0A3M9XWT1	A0A3M9YKV1	S10_plectin domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
D7B24_004034	RPS27	A0A3M9XWT1	A0A3M9Y249	S10_plectin domain-containing protein.	40S ribosomal protein S27.	0.999
D7B24_004034	RPS4	A0A3M9XWT1	A0A3M9YKM7	S10_plectin domain-containing protein.	40S ribosomal protein S4.	0.999
D7B24_004034	RRN7	A0A3M9XWT1	A0A3M9Y0Q0	S10_plectin domain-containing protein.	Pol I core factor CF.	0.998
D7B24_008005	D7B24_004034	A0A3M9Y8F9	A0A3M9XWT1	Uncharacterized protein.	S10_plectin domain-containing protein.	0.999
D7B24_008005	RPL5	A0A3M9Y8F9	A0A3M9YAH6	Uncharacterized protein.	60S ribosomal protein L5.	0.999
D7B24_008005	RPS0	A0A3M9Y8F9	A0A3M9YFG5	Uncharacterized protein.	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
D7B24_008005	RPS13	A0A3M9Y8F9	A0A3M9Y2B8	Uncharacterized protein.	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999