STRINGSTRING
RPS29 RPS29 D7B24_001031 D7B24_001031 RPS3 RPS3 TIF11 TIF11 RPS15 RPS15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS2940S ribosomal protein S29. (56 aa)
D7B24_001031Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (119 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
TIF11Translation initiation factor 1A; Belongs to the eIF-1A family. (194 aa)
RPS15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (203 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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