10 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_002396	Uncharacterized protein. (78 aa)
	D7B24_002060	Uncharacterized protein. (93 aa)
	D7B24_002017	Uncharacterized protein. (76 aa)
	D7B24_001357	Uncharacterized protein. (116 aa)
	D7B24_009126	Uncharacterized protein. (104 aa)
	D7B24_009127	Uncharacterized protein. (308 aa)
	D7B24_005170	Uncharacterized protein. (196 aa)
	D7B24_003198	Uncharacterized protein. (169 aa)
	D7B24_002435	Uncharacterized protein. (185 aa)
	D7B24_007490	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (651 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001357	D7B24_002017	A0A3M9Y0I5	A0A3M9XZM0	Uncharacterized protein.	Uncharacterized protein.	0.625
D7B24_001357	D7B24_002060	A0A3M9Y0I5	A0A3M9XZK9	Uncharacterized protein.	Uncharacterized protein.	0.881
D7B24_001357	D7B24_007490	A0A3M9Y0I5	A0A3M9YLC6	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.482
D7B24_001357	D7B24_009126	A0A3M9Y0I5	A0A3M9Y3S7	Uncharacterized protein.	Uncharacterized protein.	0.658
D7B24_001357	D7B24_009127	A0A3M9Y0I5	A0A3M9Y456	Uncharacterized protein.	Uncharacterized protein.	0.658
D7B24_002017	D7B24_001357	A0A3M9XZM0	A0A3M9Y0I5	Uncharacterized protein.	Uncharacterized protein.	0.625
D7B24_002017	D7B24_002060	A0A3M9XZM0	A0A3M9XZK9	Uncharacterized protein.	Uncharacterized protein.	0.962
D7B24_002017	D7B24_002396	A0A3M9XZM0	A0A3M9XYH8	Uncharacterized protein.	Uncharacterized protein.	0.533
D7B24_002017	D7B24_002435	A0A3M9XZM0	A0A3M9YH91	Uncharacterized protein.	Uncharacterized protein.	0.590
D7B24_002017	D7B24_003198	A0A3M9XZM0	A0A3M9YG13	Uncharacterized protein.	Uncharacterized protein.	0.533
D7B24_002017	D7B24_005170	A0A3M9XZM0	A0A3M9YCF3	Uncharacterized protein.	Uncharacterized protein.	0.476
D7B24_002017	D7B24_007490	A0A3M9XZM0	A0A3M9YLC6	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.533
D7B24_002017	D7B24_009126	A0A3M9XZM0	A0A3M9Y3S7	Uncharacterized protein.	Uncharacterized protein.	0.907
D7B24_002017	D7B24_009127	A0A3M9XZM0	A0A3M9Y456	Uncharacterized protein.	Uncharacterized protein.	0.917
D7B24_002060	D7B24_001357	A0A3M9XZK9	A0A3M9Y0I5	Uncharacterized protein.	Uncharacterized protein.	0.881
D7B24_002060	D7B24_002017	A0A3M9XZK9	A0A3M9XZM0	Uncharacterized protein.	Uncharacterized protein.	0.962
D7B24_002060	D7B24_002396	A0A3M9XZK9	A0A3M9XYH8	Uncharacterized protein.	Uncharacterized protein.	0.533
D7B24_002060	D7B24_002435	A0A3M9XZK9	A0A3M9YH91	Uncharacterized protein.	Uncharacterized protein.	0.610
D7B24_002060	D7B24_003198	A0A3M9XZK9	A0A3M9YG13	Uncharacterized protein.	Uncharacterized protein.	0.849
D7B24_002060	D7B24_005170	A0A3M9XZK9	A0A3M9YCF3	Uncharacterized protein.	Uncharacterized protein.	0.506