6 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_001232	Uncharacterized protein. (254 aa)
	PEX30	Peroxisome-protein. (617 aa)
	D7B24_007569	Pex24p domain-containing protein. (529 aa)
	D7B24_006957	Uncharacterized protein. (286 aa)
	D7B24_006958	Uncharacterized protein. (135 aa)
	D7B24_003450	FAD-binding FR-type domain-containing protein. (674 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001232	D7B24_006957	A0A3M9Y190	A0A3M9Y8X6	Uncharacterized protein.	Uncharacterized protein.	0.412
D7B24_001232	D7B24_006958	A0A3M9Y190	A0A3M9Y9S1	Uncharacterized protein.	Uncharacterized protein.	0.412
D7B24_001232	PEX30	A0A3M9Y190	A0A3M9Y5W9	Uncharacterized protein.	Peroxisome-protein.	0.412
D7B24_003450	D7B24_006957	A0A3M9YN66	A0A3M9Y8X6	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.412
D7B24_003450	D7B24_006958	A0A3M9YN66	A0A3M9Y9S1	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.412
D7B24_003450	PEX30	A0A3M9YN66	A0A3M9Y5W9	FAD-binding FR-type domain-containing protein.	Peroxisome-protein.	0.412
D7B24_006957	D7B24_001232	A0A3M9Y8X6	A0A3M9Y190	Uncharacterized protein.	Uncharacterized protein.	0.412
D7B24_006957	D7B24_003450	A0A3M9Y8X6	A0A3M9YN66	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.412
D7B24_006957	PEX30	A0A3M9Y8X6	A0A3M9Y5W9	Uncharacterized protein.	Peroxisome-protein.	0.428
D7B24_006958	D7B24_001232	A0A3M9Y9S1	A0A3M9Y190	Uncharacterized protein.	Uncharacterized protein.	0.412
D7B24_006958	D7B24_003450	A0A3M9Y9S1	A0A3M9YN66	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.412
D7B24_006958	PEX30	A0A3M9Y9S1	A0A3M9Y5W9	Uncharacterized protein.	Peroxisome-protein.	0.428
D7B24_007569	PEX30	A0A3M9Y7W7	A0A3M9Y5W9	Pex24p domain-containing protein.	Peroxisome-protein.	0.569
PEX30	D7B24_001232	A0A3M9Y5W9	A0A3M9Y190	Peroxisome-protein.	Uncharacterized protein.	0.412
PEX30	D7B24_003450	A0A3M9Y5W9	A0A3M9YN66	Peroxisome-protein.	FAD-binding FR-type domain-containing protein.	0.412
PEX30	D7B24_006957	A0A3M9Y5W9	A0A3M9Y8X6	Peroxisome-protein.	Uncharacterized protein.	0.428
PEX30	D7B24_006958	A0A3M9Y5W9	A0A3M9Y9S1	Peroxisome-protein.	Uncharacterized protein.	0.428
PEX30	D7B24_007569	A0A3M9Y5W9	A0A3M9Y7W7	Peroxisome-protein.	Pex24p domain-containing protein.	0.569