STRINGSTRING
D7B24_005949 D7B24_005949 MEU1 MEU1 D7B24_000158 D7B24_000158 D7B24_005899 D7B24_005899 D7B24_005909 D7B24_005909 RPL24 RPL24 D7B24_000135 D7B24_000135 SMD1 SMD1 D7B24_000520 D7B24_000520 D7B24_003874 D7B24_003874 D7B24_004407 D7B24_004407 D7B24_003853 D7B24_003853 LYS1_1 LYS1_1 D7B24_003154 D7B24_003154 D7B24_002793 D7B24_002793 D7B24_003156 D7B24_003156 D7B24_003159 D7B24_003159 D7B24_002870 D7B24_002870 D7B24_002841 D7B24_002841 D7B24_002594 D7B24_002594 D7B24_001965 D7B24_001965 D7B24_002270 D7B24_002270 PUF3 PUF3 D7B24_001737 D7B24_001737 RPL35 RPL35 EDC3 EDC3 D7B24_001265 D7B24_001265 D7B24_001720 D7B24_001720 D7B24_003155 D7B24_003155 D7B24_001645 D7B24_001645 D7B24_000837 D7B24_000837 D7B24_000773 D7B24_000773 SUP45 SUP45 VTS1 VTS1 RPS14 RPS14 D7B24_009153 D7B24_009153 CLU1 CLU1 THO2 THO2 D7B24_008578 D7B24_008578 D7B24_007990 D7B24_007990 NOP4 NOP4 LUC7 LUC7 D7B24_008304 D7B24_008304 D7B24_007186 D7B24_007186 SF1 SF1 BBP1 BBP1 D7B24_007281 D7B24_007281 NOC2 NOC2 CBP3 CBP3 LOC1 LOC1 D7B24_007807 D7B24_007807 RPL16B RPL16B D7B24_006311 D7B24_006311 RRP12 RRP12 D7B24_005871 D7B24_005871 PUF6 PUF6 SPT5 SPT5 D7B24_007533 D7B24_007533 D7B24_005731 D7B24_005731 RPS5 RPS5 D7B24_005772 D7B24_005772 D7B24_006552 D7B24_006552 D7B24_005578 D7B24_005578 D7B24_005647 D7B24_005647 D7B24_005628 D7B24_005628 D7B24_004768 D7B24_004768 D7B24_002701 D7B24_002701 MRPL23 MRPL23 D7B24_003018 D7B24_003018 D7B24_002124 D7B24_002124 D7B24_003760 D7B24_003760 D7B24_001449 D7B24_001449 D7B24_001140 D7B24_001140 D7B24_009263 D7B24_009263 D7B24_002476 D7B24_002476 CSTF3 CSTF3 D7B24_003510 D7B24_003510 D7B24_007476 D7B24_007476 RPS26 RPS26 D7B24_000093 D7B24_000093
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7B24_005949RRM domain-containing protein. (364 aa)
MEU1S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. (307 aa)
D7B24_000158Uncharacterized protein. (418 aa)
D7B24_005899SF3b1 domain-containing protein. (1223 aa)
D7B24_005909RRM domain-containing protein. (304 aa)
RPL2460S ribosomal protein L24. (175 aa)
D7B24_000135Uncharacterized protein. (213 aa)
SMD1Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
D7B24_000520Uncharacterized protein. (596 aa)
D7B24_003874Uncharacterized protein. (523 aa)
D7B24_004407RRM domain-containing protein. (508 aa)
D7B24_003853eIF2A domain-containing protein. (718 aa)
LYS1_1Saccharopine dehydrogenase. (378 aa)
D7B24_003154Uncharacterized protein. (1300 aa)
D7B24_002793Uncharacterized protein. (189 aa)
D7B24_003156MIF4G domain-containing protein. (1536 aa)
D7B24_003159Uncharacterized protein. (309 aa)
D7B24_002870Uncharacterized protein. (326 aa)
D7B24_002841Uncharacterized protein. (1193 aa)
D7B24_002594Uncharacterized protein. (988 aa)
D7B24_001965Uncharacterized protein. (795 aa)
D7B24_002270Uncharacterized protein. (223 aa)
PUF3mRNA binding protein puf3. (852 aa)
D7B24_001737Uncharacterized protein. (486 aa)
RPL3560S ribosomal protein L35. (125 aa)
EDC3Enhancer of mRNA decapping. (635 aa)
D7B24_001265U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (196 aa)
D7B24_001720CID domain-containing protein. (702 aa)
D7B24_003155Uncharacterized protein. (130 aa)
D7B24_001645RRM domain-containing protein. (419 aa)
D7B24_000837Uncharacterized protein. (581 aa)
D7B24_000773FHA domain-containing protein. (315 aa)
SUP45ERF1. (536 aa)
VTS1Flap-structured DNA-binding and RNA-binding protein. (589 aa)
RPS14Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
D7B24_009153Uncharacterized protein. (347 aa)
CLU1Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. (1268 aa)
THO2THO complex subunit 2. (2304 aa)
D7B24_008578Uncharacterized protein. (184 aa)
D7B24_007990WD_REPEATS_REGION domain-containing protein. (531 aa)
NOP4RNA recognition motif-containing protein. (785 aa)
LUC7Splicing factor. (271 aa)
D7B24_008304Uncharacterized protein. (810 aa)
D7B24_007186Uncharacterized protein. (1127 aa)
SF1Splicing factor 1. (328 aa)
BBP1Branchpoint-bridging protein. (585 aa)
D7B24_007281Uncharacterized protein. (248 aa)
NOC2Nucleolar Complex 2 protein. (805 aa)
CBP3Protein cbp3, mitochondrial. (351 aa)
LOC160S ribosomal subunit assembly/export protein. (202 aa)
D7B24_007807Uncharacterized protein. (457 aa)
RPL16B60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
D7B24_006311YTH domain-containing protein. (583 aa)
RRP12Pre-rRNA processing protein. (1321 aa)
D7B24_005871DUF2040 domain-containing protein. (445 aa)
PUF6Pumilio domain member 6. (708 aa)
SPT5Transcription elongation factor spt5. (1062 aa)
D7B24_007533eIF2B_5 domain-containing protein. (319 aa)
D7B24_005731RRM domain-containing protein. (197 aa)
RPS5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (212 aa)
D7B24_005772Uncharacterized protein. (568 aa)
D7B24_006552Uncharacterized protein. (276 aa)
D7B24_005578Uncharacterized protein. (585 aa)
D7B24_005647RRM domain-containing protein. (256 aa)
D7B24_005628PUM-HD domain-containing protein. (764 aa)
D7B24_004768Ribosomal_S7 domain-containing protein. (380 aa)
D7B24_002701Uncharacterized protein. (480 aa)
MRPL2354S ribosomal protein L23, mitochondrial. (179 aa)
D7B24_003018Uncharacterized protein. (601 aa)
D7B24_002124PUM-HD domain-containing protein. (1116 aa)
D7B24_003760Uncharacterized protein. (268 aa)
D7B24_001449Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (310 aa)
D7B24_001140Uncharacterized protein. (430 aa)
D7B24_009263PWI domain-containing protein. (749 aa)
D7B24_002476Uncharacterized protein. (357 aa)
CSTF3Cleavage stimulation factor subunit 3. (1145 aa)
D7B24_003510Uncharacterized protein. (1269 aa)
D7B24_007476Uncharacterized protein. (592 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
D7B24_000093Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (581 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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