10 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDC28	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily. (324 aa)
	PHO85	Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (323 aa)
	D7B24_008839	Protein kinase domain-containing protein. (459 aa)
	PPH3	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (304 aa)
	SSN3	Cyclin-dependent protein kinase. (424 aa)
	BUR1	Serine/threonine protein kinase, CMGC, CDC2/CDK sub. (587 aa)
	D7B24_002047	Protein kinase domain-containing protein. (386 aa)
	KIN28	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. (413 aa)
	D7B24_008648	Protein kinase domain-containing protein. (212 aa)
	CTK1	Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. (792 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BUR1	CTK1	A0A3M9XZG3	A0A3M9YJJ4	Serine/threonine protein kinase, CMGC, CDC2/CDK sub.	Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I.	0.674
BUR1	D7B24_002047	A0A3M9XZG3	A0A3M9XZS2	Serine/threonine protein kinase, CMGC, CDC2/CDK sub.	Protein kinase domain-containing protein.	0.427
BUR1	KIN28	A0A3M9XZG3	A0A3M9Y1K7	Serine/threonine protein kinase, CMGC, CDC2/CDK sub.	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily.	0.799
CDC28	D7B24_002047	A0A3M9YLJ3	A0A3M9XZS2	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.819
CDC28	D7B24_008839	A0A3M9YLJ3	A0A3M9Y641	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.699
CDC28	KIN28	A0A3M9YLJ3	A0A3M9Y1K7	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily.	0.905
CDC28	PPH3	A0A3M9YLJ3	A0A3M9Y9Y4	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.696
CTK1	BUR1	A0A3M9YJJ4	A0A3M9XZG3	Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I.	Serine/threonine protein kinase, CMGC, CDC2/CDK sub.	0.674
CTK1	KIN28	A0A3M9YJJ4	A0A3M9Y1K7	Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I.	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily.	0.796
D7B24_002047	BUR1	A0A3M9XZS2	A0A3M9XZG3	Protein kinase domain-containing protein.	Serine/threonine protein kinase, CMGC, CDC2/CDK sub.	0.427
D7B24_002047	CDC28	A0A3M9XZS2	A0A3M9YLJ3	Protein kinase domain-containing protein.	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	0.819
D7B24_002047	D7B24_008839	A0A3M9XZS2	A0A3M9Y641	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.648
D7B24_002047	KIN28	A0A3M9XZS2	A0A3M9Y1K7	Protein kinase domain-containing protein.	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily.	0.923
D7B24_002047	PHO85	A0A3M9XZS2	A0A3M9Y454	Protein kinase domain-containing protein.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.819
D7B24_002047	PPH3	A0A3M9XZS2	A0A3M9Y9Y4	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.599
D7B24_008648	D7B24_008839	A0A3M9YI91	A0A3M9Y641	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.595
D7B24_008648	KIN28	A0A3M9YI91	A0A3M9Y1K7	Protein kinase domain-containing protein.	TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily.	0.895
D7B24_008648	PPH3	A0A3M9YI91	A0A3M9Y9Y4	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.599
D7B24_008839	CDC28	A0A3M9Y641	A0A3M9YLJ3	Protein kinase domain-containing protein.	Cyclin-dependent kinase catalytic subunit; Belongs to the protein kinase superfamily.	0.699
D7B24_008839	D7B24_002047	A0A3M9Y641	A0A3M9XZS2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.648