STRINGSTRING
UTP25 UTP25 PNO1 PNO1 D7B24_003545 D7B24_003545 D7B24_003493 D7B24_003493 D7B24_006002 D7B24_006002 D7B24_005981 D7B24_005981 NSA2 NSA2 D7B24_000157 D7B24_000157 D7B24_005928 D7B24_005928 NOP12 NOP12 RRP9 RRP9 CDC14 CDC14 REV1 REV1 D7B24_005953 D7B24_005953 RPC40 RPC40 D7B24_007500 D7B24_007500 D7B24_000047 D7B24_000047 D7B24_003426 D7B24_003426 WDR3 WDR3 RPF2 RPF2 D7B24_002210 D7B24_002210 D7B24_000015 D7B24_000015 D7B24_007414 D7B24_007414 RRP6 RRP6 D7B24_000685 D7B24_000685 D7B24_005025 D7B24_005025 D7B24_005021 D7B24_005021 FEN1 FEN1 FAL1 FAL1 D7B24_008723 D7B24_008723 ESF1 ESF1 D7B24_005912 D7B24_005912 CTK1 CTK1 D7B24_006711 D7B24_006711 GRC3 GRC3 HAS1 HAS1 SKI6 SKI6 D7B24_007420 D7B24_007420 LIG4 LIG4 D7B24_001049 D7B24_001049 RRB1 RRB1 LSM3 LSM3 D7B24_003600 D7B24_003600 D7B24_002446 D7B24_002446 D7B24_002164 D7B24_002164 D7B24_001452 D7B24_001452 BMS1 BMS1 D7B24_001841 D7B24_001841 D7B24_001045 D7B24_001045 UTP20 UTP20 D7B24_002168 D7B24_002168 D7B24_002121 D7B24_002121 UTP6 UTP6 D7B24_004177 D7B24_004177 NOB1 NOB1 NOP9 NOP9 D7B24_002701 D7B24_002701 IMP4 IMP4 D7B24_003571 D7B24_003571 NOP10 NOP10 SOF1 SOF1 D7B24_003783 D7B24_003783 D7B24_004710 D7B24_004710 D7B24_005139 D7B24_005139 PARP1 PARP1 NOP58 NOP58 D7B24_006254 D7B24_006254 D7B24_004733 D7B24_004733 D7B24_005619 D7B24_005619 SPB4 SPB4 DDX51 DDX51 D7B24_005856 D7B24_005856 YCS4 YCS4 D7B24_005626 D7B24_005626 D7B24_006051 D7B24_006051 D7B24_004825 D7B24_004825 RPB8 RPB8 D7B24_005854 D7B24_005854 NHP2 NHP2 SNU13 SNU13 D7B24_005304 D7B24_005304 D7B24_007230 D7B24_007230 NIP7 NIP7 MTR3 MTR3 DIM1 DIM1 D7B24_006256 D7B24_006256 RPB6 RPB6 EFG1 EFG1 D7B24_005829 D7B24_005829 NOP1 NOP1 DBP10 DBP10 D7B24_007012 D7B24_007012 D7B24_007673 D7B24_007673 D7B24_006249 D7B24_006249 D7B24_007633 D7B24_007633 PUF6 PUF6 D7B24_006066 D7B24_006066 D7B24_006255 D7B24_006255 D7B24_007884 D7B24_007884 D7B24_007317 D7B24_007317 D7B24_007383 D7B24_007383 DBP8 DBP8 CKB2 CKB2 D7B24_007099 D7B24_007099 ABT1 ABT1 RRP36 RRP36 LOC1 LOC1 D7B24_006564 D7B24_006564 ECM16 ECM16 DBP3 DBP3 WDR36 WDR36 D7B24_007058 D7B24_007058 PXR1 PXR1 NOC2 NOC2 UTP7 UTP7 UTP4 UTP4 NOP16 NOP16 D7B24_007076 D7B24_007076 D7B24_007186 D7B24_007186 BFR2 BFR2 KRI1 KRI1 D7B24_007784 D7B24_007784 D7B24_008809 D7B24_008809 CBF5 CBF5 JIP5 JIP5 DBP7 DBP7 NOP14 NOP14 D7B24_008955 D7B24_008955 TIF6 TIF6 D7B24_008983 D7B24_008983 NOP56 NOP56 NOG2 NOG2 D7B24_008243 D7B24_008243 D7B24_009077 D7B24_009077 MDN1 MDN1 MRD1 MRD1 ACR2 ACR2 D7B24_008469 D7B24_008469 KRR1 KRR1 CSL4 CSL4 RRP4 RRP4 D7B24_008834 D7B24_008834 LSM4 LSM4 UTP10 UTP10 RPB10 RPB10 UTP13 UTP13 MAK5 MAK5 D7B24_008870 D7B24_008870 UTP5 UTP5 NOL6 NOL6 D7B24_009062 D7B24_009062 D7B24_009082 D7B24_009082 RPP40 RPP40 D7B24_009389 D7B24_009389 D7B24_009627 D7B24_009627 D7B24_001576 D7B24_001576 D7B24_009589 D7B24_009589 RPC10 RPC10 D7B24_009541 D7B24_009541 MTR4 MTR4 RRP46 RRP46 RPA49 RPA49 RRN3 RRN3 KRE33 KRE33 D7B24_000733 D7B24_000733 RPS13 RPS13 D7B24_000502 D7B24_000502 IMP3 IMP3 RPA12 RPA12 YTM1 YTM1 D7B24_000798 D7B24_000798 SGD1 SGD1 D7B24_002053 D7B24_002053 D7B24_000800 D7B24_000800 POLR1D POLR1D EMG1 EMG1 RRP5 RRP5 CKB1 CKB1 EXOSC8 EXOSC8 GAR1_1 GAR1_1 D7B24_002945 D7B24_002945 RPC11 RPC11 NOP7 NOP7 D7B24_001034 D7B24_001034 RPB5 RPB5 MRTO4 MRTO4 GTPBP4 GTPBP4 D7B24_003127 D7B24_003127 D7B24_003882 D7B24_003882 NOP2 NOP2 D7B24_001573 D7B24_001573 LSM5 LSM5 RRP8 RRP8 D7B24_002287 D7B24_002287 TOP1 TOP1 D7B24_002591 D7B24_002591 NLE1 NLE1 SDAD1 SDAD1 ERB1 ERB1 D7B24_002580 D7B24_002580 ROK1 ROK1 RRP40 RRP40 D7B24_002946 D7B24_002946 PAK1IP1 PAK1IP1 D7B24_003159 D7B24_003159 D7B24_002793 D7B24_002793 D7B24_003342 D7B24_003342 UTP11 UTP11 SPB1 SPB1 D7B24_002902 D7B24_002902 D7B24_003865 D7B24_003865 D7B24_004231 D7B24_004231 D7B24_003851 D7B24_003851 D7B24_004260 D7B24_004260 NSUN5 NSUN5 ENP1 ENP1 D7B24_004269 D7B24_004269 GNL3 GNL3 D7B24_004236 D7B24_004236
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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UTP25U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (773 aa)
PNO1Pre-rRNA-processing protein pno1. (257 aa)
D7B24_003545SRP40_C domain-containing protein. (473 aa)
D7B24_003493WD_REPEATS_REGION domain-containing protein. (634 aa)
D7B24_006002WD_REPEATS_REGION domain-containing protein. (598 aa)
D7B24_005981Uncharacterized protein. (402 aa)
NSA2Ribosome bioproteinsis protein. (284 aa)
D7B24_000157Uncharacterized protein. (710 aa)
D7B24_005928Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (196 aa)
NOP12Nucleolar protein 12. (550 aa)
RRP9Pre-rRNA processing protein. (606 aa)
CDC14Cell division control protein 14. (633 aa)
REV1Deoxycytidyl transferase. (1184 aa)
D7B24_005953rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (118 aa)
RPC40DNA-directed RNA polymerase core subunit rpc40. (375 aa)
D7B24_007500Uncharacterized protein. (215 aa)
D7B24_000047PPM-type phosphatase domain-containing protein. (786 aa)
D7B24_003426Uncharacterized protein. (940 aa)
WDR3Dip2/Utp12 protein. (1050 aa)
RPF2rRNA-binding ribosome biosynthesis protein rpf2. (317 aa)
D7B24_002210tRNA dimethylallyltransferase. (492 aa)
D7B24_000015Uncharacterized protein. (326 aa)
D7B24_007414Uncharacterized protein. (144 aa)
RRP6Exosome nuclease subunit. (841 aa)
D7B24_000685Uncharacterized protein. (185 aa)
D7B24_005025Uncharacterized protein. (181 aa)
D7B24_005021RRM domain-containing protein. (316 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (394 aa)
FAL1RNA helicase; Belongs to the DEAD box helicase family. (401 aa)
D7B24_008723Protein kinase domain-containing protein. (947 aa)
ESF1Pre-rRNA-processing protein esf1. (699 aa)
D7B24_005912CBF domain-containing protein. (546 aa)
CTK1Kinase subunit of RNA polymerase II carboxy-terminal domain kinase I. (792 aa)
D7B24_006711Cytochrome b5 heme-binding domain-containing protein. (754 aa)
GRC3Polynucleotide 5'-hydroxyl-kinase grc3. (743 aa)
HAS1RNA helicase. (706 aa)
SKI6Exosome non-catalytic core component. (265 aa)
D7B24_007420CutC domain-containing protein. (79 aa)
LIG4DNA ligase. (1008 aa)
D7B24_001049SWIB domain-containing protein. (268 aa)
RRB1Ribosome biosynthesis protein rrb1. (492 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
D7B24_003600Uncharacterized protein. (233 aa)
D7B24_002446J domain-containing protein. (444 aa)
D7B24_002164Uncharacterized protein. (345 aa)
D7B24_001452Uncharacterized protein. (1028 aa)
BMS1Glycoside hydrolase 2 (Mannanase, beta-galactosidase). (1159 aa)
D7B24_001841Uncharacterized protein. (581 aa)
D7B24_001045Methyltransf_25 domain-containing protein. (208 aa)
UTP20U3 snoRNP protein. (2640 aa)
D7B24_002168Stc1 domain-containing protein. (492 aa)
D7B24_002121RRM domain-containing protein. (386 aa)
UTP6U3 snoRNP protein. (416 aa)
D7B24_004177Brix domain-containing protein. (462 aa)
NOB1Nin1 binding protein. (472 aa)
NOP9Nucleolar protein 9. (748 aa)
D7B24_002701Uncharacterized protein. (480 aa)
IMP4SnoRNA-binding rRNA-processing protein imp4. (293 aa)
D7B24_003571Uncharacterized protein. (704 aa)
NOP10snoRNP complex protein. (66 aa)
SOF1rRNA-processing protein sof1. (448 aa)
D7B24_003783BRCT domain-containing protein. (854 aa)
D7B24_004710Uncharacterized protein. (456 aa)
D7B24_005139Uncharacterized protein. (389 aa)
PARP1Poly [ADP-ribose] polymerase. (726 aa)
NOP58Nucleolar protein 58. (655 aa)
D7B24_006254Uncharacterized protein. (464 aa)
D7B24_004733Uncharacterized protein. (689 aa)
D7B24_005619Uncharacterized protein. (754 aa)
SPB4RNA helicase. (632 aa)
DDX51ATP-dependent RNA helicase ddx51; Belongs to the DEAD box helicase family. (775 aa)
D7B24_005856Uncharacterized protein. (237 aa)
YCS4Condensin complex subunit. (1238 aa)
D7B24_005626RNase III domain-containing protein. (426 aa)
D7B24_006051RPA43_OB domain-containing protein. (486 aa)
D7B24_004825Transket_pyr domain-containing protein. (408 aa)
RPB8DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (152 aa)
D7B24_005854Uncharacterized protein. (694 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (232 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
D7B24_005304Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (348 aa)
D7B24_007230Uncharacterized protein. (449 aa)
NIP760S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
MTR33'-5'-exoribonuclease. (291 aa)
DIM1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (370 aa)
D7B24_006256Uncharacterized protein. (363 aa)
RPB6DNA-directed RNA polymerases I II and III subunit RPABC2. (149 aa)
EFG118S rRNA maturation protein. (283 aa)
D7B24_005829Uncharacterized protein. (734 aa)
NOP1Small subunit processome complex component. (325 aa)
DBP10ATP-dependent RNA helicase DBP10. (902 aa)
D7B24_007012Uncharacterized protein. (272 aa)
D7B24_007673DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1706 aa)
D7B24_006249Uncharacterized protein. (1751 aa)
D7B24_007633Uncharacterized protein. (209 aa)
PUF6Pumilio domain member 6. (708 aa)
D7B24_006066Uncharacterized protein. (1337 aa)
D7B24_006255Uncharacterized protein. (85 aa)
D7B24_007884Uncharacterized protein. (916 aa)
D7B24_007317Uncharacterized protein. (308 aa)
D7B24_007383zf-LYAR domain-containing protein. (387 aa)
DBP8Putative RNA helicase; Belongs to the DEAD box helicase family. (556 aa)
CKB2Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (256 aa)
D7B24_007099Ribosomal_L28e domain-containing protein. (321 aa)
ABT1Activator of basal transcription 1. (315 aa)
RRP36rRNA bioproteinsis protein rrp36. (299 aa)
LOC160S ribosomal subunit assembly/export protein. (202 aa)
D7B24_006564DUF2431 domain-containing protein. (402 aa)
ECM16Putative ATP-dependent RNA helicase DHR1. (1197 aa)
DBP3RNA-dependent ATPase; Belongs to the DEAD box helicase family. (595 aa)
WDR36WD repeat-containing protein 36. (1042 aa)
D7B24_007058FCP1 homology domain-containing protein. (347 aa)
PXR1Telomerase inhibitor. (362 aa)
NOC2Nucleolar Complex 2 protein. (805 aa)
UTP7Small subunit (SSU) processome component. (553 aa)
UTP4U3 small nucleolar RNA-associated protein. (911 aa)
NOP16Nucleolar protein 16. (231 aa)
D7B24_007076Checkpoint protein; Belongs to the HUS1 family. (339 aa)
D7B24_007186Uncharacterized protein. (1127 aa)
BFR2rRNA-processing protein bfr2. (594 aa)
KRI1KRRI-Interacting protein 1. (690 aa)
D7B24_007784Bms1-type G domain-containing protein. (820 aa)
D7B24_008809Uncharacterized protein. (815 aa)
CBF5Centromere/microtubule-binding protein cbf5. (465 aa)
JIP5WD repeat-containing protein jip5. (431 aa)
DBP7ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. (770 aa)
NOP14Nucleolar complex protein 14. (915 aa)
D7B24_008955PH_6 domain-containing protein. (550 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
D7B24_008983Smr domain-containing protein. (543 aa)
NOP56snoRNP complex protein nop56. (510 aa)
NOG2Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (609 aa)
D7B24_008243Uncharacterized protein. (277 aa)
D7B24_009077Uncharacterized protein. (200 aa)
MDN1AAA ATPase midasin. (4969 aa)
MRD1Multiple RNA-binding domain-containing protein 1. (866 aa)
ACR2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1231 aa)
D7B24_008469Csm1 domain-containing protein. (309 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (319 aa)
CSL4Exosome 3'->5 exonuclease subunit ski4 (Csl4). (211 aa)
RRP4Exosome non-catalytic core subunit rrp4. (353 aa)
D7B24_008834SRP9-21 domain-containing protein. (161 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (180 aa)
UTP10SnoRNA-binding rRNA-processing protein utp10. (1809 aa)
RPB10DNA-directed RNA polymerase II subunit L. (76 aa)
UTP13U3 small nucleolar RNA-associated protein 13. (906 aa)
MAK5ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (787 aa)
D7B24_008870Fcf2 domain-containing protein. (197 aa)
UTP5Small subunit (SSU) processome component. (433 aa)
NOL6U3 small nucleolar RNA-associated protein 22. (1102 aa)
D7B24_009062WD_REPEATS_REGION domain-containing protein. (968 aa)
D7B24_009082Sec2p domain-containing protein. (329 aa)
RPP40Ribonuclease P protein subunit p40. (338 aa)
D7B24_009389CBF domain-containing protein. (1016 aa)
D7B24_009627Uncharacterized protein. (244 aa)
D7B24_001576RNase_PH domain-containing protein. (366 aa)
D7B24_009589Uncharacterized protein. (876 aa)
RPC10DNA-directed RNA polymerase core subunit rpc10. (81 aa)
D7B24_009541zf-U1 domain-containing protein. (292 aa)
MTR4ATP-dependent RNA helicase mtr4. (1106 aa)
RRP46Exosome non-catalytic core subunit rrp46. (249 aa)
RPA49DNA-directed RNA polymerase I subunit rpa49. (459 aa)
RRN3DNA independent RNA polymerase I transcription factor. (693 aa)
KRE33RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1065 aa)
D7B24_00073325S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (294 aa)
RPS13Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
D7B24_000502Uncharacterized protein. (258 aa)
IMP3Small subunit (SSU) processome component. (183 aa)
RPA12DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (483 aa)
D7B24_000798Urb2 domain-containing protein. (1392 aa)
SGD1Suppressor of glycerol defect. (848 aa)
D7B24_002053Uncharacterized protein. (383 aa)
D7B24_000800Sas10 domain-containing protein. (668 aa)
POLR1DDNA-directed RNA polymerases I and III subunit RPAC2. (149 aa)
EMG118S rRNA pseudouridine methyltransferase. (276 aa)
RRP5rRNA bioproteinsis protein rrp5. (1809 aa)
CKB1Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (340 aa)
EXOSC8Exosome complex component RRP43. (336 aa)
GAR1_1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (155 aa)
D7B24_002945Uncharacterized protein. (281 aa)
RPC11DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (665 aa)
D7B24_001034Uncharacterized protein. (221 aa)
RPB5DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). (231 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
GTPBP4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (658 aa)
D7B24_003127Uncharacterized protein. (941 aa)
D7B24_003882Uncharacterized protein. (229 aa)
NOP2rRNA (Cytosine-C5-)-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (766 aa)
D7B24_001573Uncharacterized protein. (784 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (80 aa)
RRP8Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (572 aa)
D7B24_002287WD_REPEATS_REGION domain-containing protein. (905 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (911 aa)
D7B24_002591SANT domain-containing protein. (578 aa)
NLE1Notchless protein 1. (515 aa)
SDAD1Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (751 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (766 aa)
D7B24_002580Uncharacterized protein. (1315 aa)
ROK1RNA-dependent ATPase rok1. (768 aa)
RRP40Exosome non-catalytic core subunit rrp40. (245 aa)
D7B24_002946Uncharacterized protein. (81 aa)
PAK1IP1P21-activated protein kinase-interacting protein 1-like protein. (494 aa)
D7B24_003159Uncharacterized protein. (309 aa)
D7B24_002793Uncharacterized protein. (189 aa)
D7B24_003342Uncharacterized protein. (95 aa)
UTP11Small subunit (SSU) processome component. (269 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (862 aa)
D7B24_002902Uncharacterized protein. (578 aa)
D7B24_003865HMG box domain-containing protein. (348 aa)
D7B24_004231Uncharacterized protein. (276 aa)
D7B24_003851Uncharacterized protein. (604 aa)
D7B24_004260Cir_N domain-containing protein. (363 aa)
NSUN5Putative 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (584 aa)
ENP1SnoRNA-binding rRNA-processing protein. (483 aa)
D7B24_004269Brix domain-containing protein. (420 aa)
GNL3Guanine nucleotide-binding protein-like 3. (545 aa)
D7B24_004236Uncharacterized protein. (340 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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