STRINGSTRING
UGA1_1 UGA1_1 D7B24_002296 D7B24_002296 D7B24_001601 D7B24_001601 GLT1 GLT1 D7B24_008927 D7B24_008927 UGA2_2 UGA2_2 D7B24_000369 D7B24_000369 UGA1_2 UGA1_2 D7B24_008770 D7B24_008770 UGA2_1 UGA2_1 D7B24_007021 D7B24_007021 ALDH5A1_3 ALDH5A1_3 D7B24_004284 D7B24_004284 D7B24_004885 D7B24_004885 CAR2 CAR2 ALDH5A1_2 ALDH5A1_2 ALDH4A1 ALDH4A1 GDH2 GDH2 ALDH5A1_1 ALDH5A1_1 PUT1 PUT1 D7B24_008721 D7B24_008721 PUT2 PUT2 MEU1 MEU1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UGA1_14-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (502 aa)
D7B24_002296Uncharacterized protein. (286 aa)
D7B24_001601ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (452 aa)
GLT1Glutamate synthase [NADH]. (2257 aa)
D7B24_008927Uncharacterized protein. (88 aa)
UGA2_2Succinate-semialdehyde dehydrogenase. (494 aa)
D7B24_000369Uncharacterized protein. (309 aa)
UGA1_24-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
D7B24_008770Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (468 aa)
UGA2_1Succinate-semialdehyde dehydrogenase. (489 aa)
D7B24_007021Glutamate decarboxylase; Belongs to the group II decarboxylase family. (560 aa)
ALDH5A1_3Succinate-semialdehyde dehydrogenase, mitochondrial. (505 aa)
D7B24_004284Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (481 aa)
D7B24_004885Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (498 aa)
CAR2Ornithine aminotransferase. (444 aa)
ALDH5A1_2Succinate-semialdehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family. (498 aa)
ALDH4A1Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (580 aa)
GDH2NAD-dependent glutamate dehydrogenase. (1082 aa)
ALDH5A1_1Succinate-semialdehyde dehydrogenase, mitochondrial. (501 aa)
PUT1Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (499 aa)
D7B24_008721Uncharacterized protein. (465 aa)
PUT2Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (590 aa)
MEU1S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. (307 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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