29 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	SEC24	COPII subunit. (957 aa)
	GLO3	Glyoxalase. (482 aa)
	SEC21	Coatomer subunit gamma. (917 aa)
	SEC13	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family. (356 aa)
	APS2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	APL5	AP-3 complex subunit delta. (1073 aa)
	D7B24_000899	Uncharacterized protein. (191 aa)
	APL2	Beta-adaptin. (743 aa)
	SEC26	Coatomer subunit beta. (908 aa)
	D7B24_001313	WD_REPEATS_REGION domain-containing protein. (1192 aa)
	SEC23	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
	APL4	Clathrin associated protein complex large subunit. (837 aa)
	D7B24_008515	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (534 aa)
	D7B24_008293	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (515 aa)
	D7B24_007818	Alpha_adaptinC2 domain-containing protein. (982 aa)
	D7B24_007741	Uncharacterized protein. (294 aa)
	D7B24_009132	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (240 aa)
	RET3	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (199 aa)
	D7B24_006646	DUF1681 domain-containing protein. (279 aa)
	D7B24_006449	CFEM domain-containing protein. (192 aa)
	D7B24_006431	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
	AP1M1	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (430 aa)
	AP3S2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (189 aa)
	SFB3	COPII coat Sec23p-Sfb3p heterodimer component. (1052 aa)
	D7B24_001469	Uncharacterized protein. (1679 aa)
	D7B24_009247	WD_REPEATS_REGION domain-containing protein. (853 aa)
	ENT3	Epsin-3. (523 aa)
	D7B24_008682	CFEM domain-containing protein. (174 aa)
	VAS2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1M1	AP3S2	A0A3M9YE47	A0A3M9YH36	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.783
AP1M1	APL2	A0A3M9YE47	A0A3M9Y1L2	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Beta-adaptin.	0.999
AP1M1	APL4	A0A3M9YE47	A0A3M9Y585	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin associated protein complex large subunit.	0.999
AP1M1	APL5	A0A3M9YE47	A0A3M9Y0I9	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit delta.	0.871
AP1M1	APS2	A0A3M9YE47	A0A3M9Y004	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.661
AP1M1	D7B24_000899	A0A3M9YE47	A0A3M9Y0Q1	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.403
AP1M1	D7B24_001469	A0A3M9YE47	A0A3M9YIY0	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.869
AP1M1	D7B24_006431	A0A3M9YE47	A0A3M9Y980	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.676
AP1M1	D7B24_006449	A0A3M9YE47	A0A3M9Y971	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	CFEM domain-containing protein.	0.403
AP1M1	D7B24_006646	A0A3M9YE47	A0A3M9Y955	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	DUF1681 domain-containing protein.	0.642
AP1M1	D7B24_008515	A0A3M9YE47	A0A3M9Y4T8	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.429
AP1M1	D7B24_008682	A0A3M9YE47	A0A3M9YJN0	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	CFEM domain-containing protein.	0.403
AP1M1	D7B24_009132	A0A3M9YE47	A0A3M9Y6Z5	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.880
AP1M1	VAS2	A0A3M9YE47	A0A3M9Y5B3	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
AP3S2	AP1M1	A0A3M9YH36	A0A3M9YE47	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.783
AP3S2	APL2	A0A3M9YH36	A0A3M9Y1L2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Beta-adaptin.	0.702
AP3S2	APL4	A0A3M9YH36	A0A3M9Y585	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin associated protein complex large subunit.	0.970
AP3S2	APL5	A0A3M9YH36	A0A3M9Y0I9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-3 complex subunit delta.	0.992
AP3S2	D7B24_000899	A0A3M9YH36	A0A3M9Y0Q1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.914
AP3S2	D7B24_001469	A0A3M9YH36	A0A3M9YIY0	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.634