13 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AP1M1	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (430 aa)
	APS2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
	D7B24_008682	CFEM domain-containing protein. (174 aa)
	APL5	AP-3 complex subunit delta. (1073 aa)
	D7B24_000899	Uncharacterized protein. (191 aa)
	APL2	Beta-adaptin. (743 aa)
	D7B24_008515	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (534 aa)
	APL4	Clathrin associated protein complex large subunit. (837 aa)
	VAS2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)
	D7B24_007818	Alpha_adaptinC2 domain-containing protein. (982 aa)
	D7B24_006449	CFEM domain-containing protein. (192 aa)
	D7B24_006431	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
	AP3S2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (189 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1M1	AP3S2	A0A3M9YE47	A0A3M9YH36	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.783
AP1M1	APL2	A0A3M9YE47	A0A3M9Y1L2	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Beta-adaptin.	0.999
AP1M1	APL4	A0A3M9YE47	A0A3M9Y585	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin associated protein complex large subunit.	0.999
AP1M1	APL5	A0A3M9YE47	A0A3M9Y0I9	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit delta.	0.871
AP1M1	APS2	A0A3M9YE47	A0A3M9Y004	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.661
AP1M1	D7B24_000899	A0A3M9YE47	A0A3M9Y0Q1	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.403
AP1M1	D7B24_006431	A0A3M9YE47	A0A3M9Y980	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.676
AP1M1	D7B24_006449	A0A3M9YE47	A0A3M9Y971	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	CFEM domain-containing protein.	0.403
AP1M1	D7B24_008515	A0A3M9YE47	A0A3M9Y4T8	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.429
AP1M1	D7B24_008682	A0A3M9YE47	A0A3M9YJN0	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	CFEM domain-containing protein.	0.403
AP1M1	VAS2	A0A3M9YE47	A0A3M9Y5B3	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
AP3S2	AP1M1	A0A3M9YH36	A0A3M9YE47	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.783
AP3S2	APL2	A0A3M9YH36	A0A3M9Y1L2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Beta-adaptin.	0.702
AP3S2	APL4	A0A3M9YH36	A0A3M9Y585	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin associated protein complex large subunit.	0.970
AP3S2	APL5	A0A3M9YH36	A0A3M9Y0I9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-3 complex subunit delta.	0.992
AP3S2	D7B24_000899	A0A3M9YH36	A0A3M9Y0Q1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.914
AP3S2	D7B24_006449	A0A3M9YH36	A0A3M9Y971	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	CFEM domain-containing protein.	0.914
AP3S2	D7B24_008515	A0A3M9YH36	A0A3M9Y4T8	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.975
AP3S2	D7B24_008682	A0A3M9YH36	A0A3M9YJN0	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	CFEM domain-containing protein.	0.914
AP3S2	VAS2	A0A3M9YH36	A0A3M9Y5B3	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.634