STRINGSTRING
PAN1 PAN1 D7B24_004063 D7B24_004063 ARP3 ARP3 VPS1 VPS1 LSB5 LSB5 ARC18 ARC18 D7B24_004976 D7B24_004976 D7B24_003454 D7B24_003454 D7B24_005019 D7B24_005019 SLA2 SLA2 D7B24_003502 D7B24_003502 D7B24_007454 D7B24_007454 ARC19 ARC19 ARP2 ARP2 AIP1 AIP1 HOB3 HOB3 D7B24_006639 D7B24_006639 D7B24_006993 D7B24_006993 D7B24_003629 D7B24_003629 D7B24_001469 D7B24_001469 D7B24_002703 D7B24_002703 SLA1 SLA1 D7B24_003793 D7B24_003793 END3 END3 D7B24_008480 D7B24_008480 SAC6 SAC6 D7B24_009059 D7B24_009059 MYO1 MYO1 D7B24_009588 D7B24_009588 D7B24_001551 D7B24_001551 D7B24_001540 D7B24_001540 D7B24_002216 D7B24_002216 D7B24_001745 D7B24_001745 D7B24_004086 D7B24_004086
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PAN1Actin organization and endocytosis protein. (2219 aa)
D7B24_004063DUF2013 domain-containing protein. (490 aa)
ARP3Actin; Belongs to the actin family. (439 aa)
VPS1Vacuolar protein sorting-associated protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (837 aa)
LSB5Putative actin patch assembly and actin polymerization protein. (436 aa)
ARC18Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (193 aa)
D7B24_004976Uncharacterized protein. (776 aa)
D7B24_003454Uncharacterized protein. (661 aa)
D7B24_005019Uncharacterized protein. (791 aa)
SLA2Sla2 Src like adaptor 2. (1026 aa)
D7B24_003502SH3 domain-containing protein. (413 aa)
D7B24_007454IPPc domain-containing protein. (1167 aa)
ARC19Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
ARP2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (389 aa)
AIP1WD40 repeat-like protein. (610 aa)
HOB3BAR adaptor protein Hob3. (389 aa)
D7B24_006639SH3 domain-containing protein. (1243 aa)
D7B24_006993WH2 domain-containing protein. (307 aa)
D7B24_003629Uncharacterized protein. (1280 aa)
D7B24_001469Uncharacterized protein. (1679 aa)
D7B24_002703WH2 domain-containing protein. (449 aa)
SLA1Cytoskeletal protein binding protein. (1081 aa)
D7B24_003793Calponin-homology (CH) domain-containing protein. (725 aa)
END3Endocytosis defective-protein. (398 aa)
D7B24_008480Adenylyl cyclase-associated protein; Belongs to the CAP family. (525 aa)
SAC6Fimbrin. (649 aa)
D7B24_009059Uncharacterized protein. (265 aa)
MYO1Class II myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1222 aa)
D7B24_009588Uncharacterized protein. (432 aa)
D7B24_001551Uncharacterized protein. (695 aa)
D7B24_001540Uncharacterized protein. (749 aa)
D7B24_002216Uncharacterized protein. (829 aa)
D7B24_001745ADF-H domain-containing protein. (141 aa)
D7B24_004086WH1 domain-containing protein. (334 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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