STRINGSTRING
APS2 APS2 D7B24_009130 D7B24_009130 D7B24_008293 D7B24_008293 VPS53 VPS53 VPS28 VPS28 VAS2 VAS2 APL4 APL4 D7B24_001962 D7B24_001962 VRG4 VRG4 VPS4 VPS4 TRR1 TRR1 SEC23 SEC23 D7B24_009353 D7B24_009353 D7B24_001313 D7B24_001313 MON1 MON1 CHMP4C CHMP4C SEC26 SEC26 D7B24_009279 D7B24_009279 D7B24_000843 D7B24_000843 SAR1_1 SAR1_1 APL2 APL2 VPS27 VPS27 D7B24_003452 D7B24_003452 D7B24_003421 D7B24_003421 ATG8 ATG8 D7B24_003453 D7B24_003453 D7B24_000181 D7B24_000181 WDR45L WDR45L D7B24_000180 D7B24_000180 ENT3 ENT3 CHMP2A CHMP2A D7B24_009247 D7B24_009247 D7B24_001469 D7B24_001469 SERAC1_1 SERAC1_1 D7B24_000234 D7B24_000234 SFB3 SFB3 AP3S2 AP3S2 DID2 DID2 D7B24_003284 D7B24_003284 D7B24_001860 D7B24_001860 USO1 USO1 AKR1 AKR1 D7B24_004715 D7B24_004715 SSH4 SSH4 D7B24_003629 D7B24_003629 D7B24_004814 D7B24_004814 BOS1 BOS1 D7B24_004714 D7B24_004714 AP1M1 AP1M1 SLA1 SLA1 D7B24_004616 D7B24_004616 PEP7 PEP7 ATG24 ATG24 VPS24 VPS24 LST8 LST8 SAR1_2 SAR1_2 ATG6 ATG6 D7B24_006107 D7B24_006107 VPS55 VPS55 D7B24_006261 D7B24_006261 D7B24_006431 D7B24_006431 D7B24_006553 D7B24_006553 D7B24_006646 D7B24_006646 D7B24_007113 D7B24_007113 D7B24_007112 D7B24_007112 SEC22 SEC22 ATG18 ATG18 D7B24_007209 D7B24_007209 PSD2 PSD2 RET3 RET3 D7B24_007810 D7B24_007810 D7B24_009132 D7B24_009132 D7B24_007530 D7B24_007530 RIM13 RIM13 HSE1 HSE1 FAB1 FAB1 END3 END3 D7B24_007741 D7B24_007741 D7B24_001984 D7B24_001984 ATG15 ATG15 SEC13 SEC13 VMA21 VMA21 D7B24_003068 D7B24_003068 SEC21 SEC21 GLO3 GLO3 PAN1 PAN1 SEC31 SEC31 D7B24_004197 D7B24_004197 SEC24 SEC24 D7B24_007818 D7B24_007818 CHMP6 CHMP6 D7B24_001404 D7B24_001404 ATG9 ATG9 YPT52 YPT52 APL5 APL5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APS2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (143 aa)
D7B24_009130t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (360 aa)
D7B24_008293Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (515 aa)
VPS53Vacuolar protein sorting-associated protein 53; Belongs to the glycosyl hydrolase 18 family. (1256 aa)
VPS28Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (238 aa)
VAS2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)
APL4Clathrin associated protein complex large subunit. (837 aa)
D7B24_001962Uncharacterized protein. (298 aa)
VRG4GDP-mannose transporter into the lumen of the Golgi. (394 aa)
VPS4Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (430 aa)
TRR1Thioredoxin reductase. (330 aa)
SEC23Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
D7B24_009353Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (183 aa)
D7B24_001313WD_REPEATS_REGION domain-containing protein. (1192 aa)
MON1Vacuolar fusion protein mon1. (598 aa)
CHMP4CCharged multivesicular body protein 4C. (223 aa)
SEC26Coatomer subunit beta. (908 aa)
D7B24_009279Uncharacterized protein. (865 aa)
D7B24_000843Uncharacterized protein. (1005 aa)
SAR1_1COPII coat GTPase; Belongs to the small GTPase superfamily. SAR1 family. (183 aa)
APL2Beta-adaptin. (743 aa)
VPS27Vacuolar protein-sorting-associated protein 27. (699 aa)
D7B24_003452Protein kinase domain-containing protein. (509 aa)
D7B24_003421Uncharacterized protein. (203 aa)
ATG8Autophagy-related protein. (121 aa)
D7B24_003453Uncharacterized protein. (260 aa)
D7B24_000181Lipase_3 domain-containing protein. (430 aa)
WDR45LWD repeat domain phosphoinositide-interacting protein 3. (377 aa)
D7B24_000180Uncharacterized protein. (181 aa)
ENT3Epsin-3. (523 aa)
CHMP2ACharged multivesicular body protein 2A. (201 aa)
D7B24_009247WD_REPEATS_REGION domain-containing protein. (853 aa)
D7B24_001469Uncharacterized protein. (1679 aa)
SERAC1_1GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (1260 aa)
D7B24_000234Uncharacterized protein. (417 aa)
SFB3COPII coat Sec23p-Sfb3p heterodimer component. (1052 aa)
AP3S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (189 aa)
DID2Vacuolar-sorting protein SNF7. (205 aa)
D7B24_003284GFA domain-containing protein. (176 aa)
D7B24_001860Uncharacterized protein. (653 aa)
USO1Vesicle-mediated ER to Golgi transport protein. (995 aa)
AKR1Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (734 aa)
D7B24_004715Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1869 aa)
SSH4Protein ssh4. (502 aa)
D7B24_003629Uncharacterized protein. (1280 aa)
D7B24_004814Uncharacterized protein. (207 aa)
BOS1Protein transport protein bos1. (275 aa)
D7B24_004714Cytochrome b5 heme-binding domain-containing protein. (1793 aa)
AP1M1AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (430 aa)
SLA1Cytoskeletal protein binding protein. (1081 aa)
D7B24_004616GLUE N-terminal domain-containing protein. (666 aa)
PEP7Carboxypeptidase Y-deficient. (644 aa)
ATG24Sorting nexin-4. (475 aa)
VPS24Vacuolar protein-sorting-associated protein 24. (264 aa)
LST8TOR complex subunit lst8. (318 aa)
SAR1_2COPII coat GTPase; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
ATG6Autophagy protein 6. (488 aa)
D7B24_006107Uncharacterized protein. (652 aa)
VPS55Vacuolar protein sorting-associated protein 55. (129 aa)
D7B24_006261Uncharacterized protein. (751 aa)
D7B24_006431MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (437 aa)
D7B24_006553IPPc domain-containing protein. (1034 aa)
D7B24_006646DUF1681 domain-containing protein. (279 aa)
D7B24_007113Uncharacterized protein. (359 aa)
D7B24_007112Uncharacterized protein. (274 aa)
SEC22SNAP receptor; Belongs to the synaptobrevin family. (217 aa)
ATG18Autophagy-protein. (439 aa)
D7B24_007209Uncharacterized protein. (474 aa)
PSD2Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily. (1162 aa)
RET3Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (199 aa)
D7B24_007810t-SNARE coiled-coil homology domain-containing protein. (231 aa)
D7B24_009132Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (240 aa)
D7B24_007530Uncharacterized protein. (819 aa)
RIM13Cysteine protease; Belongs to the peptidase C2 family. (865 aa)
HSE1ESCRT-0 subunit protein hse1. (689 aa)
FAB11-phosphatidylinositol-3-phosphate 5-kinase. (1994 aa)
END3Endocytosis defective-protein. (398 aa)
D7B24_007741Uncharacterized protein. (294 aa)
D7B24_001984Uncharacterized protein. (667 aa)
ATG15Putative lipase atg15. (622 aa)
SEC13GTPase-activating protein S13; Belongs to the WD repeat SEC13 family. (356 aa)
VMA21Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (111 aa)
D7B24_003068Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
SEC21Coatomer subunit gamma. (917 aa)
GLO3Glyoxalase. (482 aa)
PAN1Actin organization and endocytosis protein. (2219 aa)
SEC31Protein transport protein S31. (1264 aa)
D7B24_004197Uncharacterized protein. (348 aa)
SEC24COPII subunit. (957 aa)
D7B24_007818Alpha_adaptinC2 domain-containing protein. (982 aa)
CHMP6Charged multivesicular body protein 6. (198 aa)
D7B24_001404Tyrosinase_Cu-bd domain-containing protein. (343 aa)
ATG9Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (911 aa)
YPT52GTP-binding protein of the rab/ypt. (222 aa)
APL5AP-3 complex subunit delta. (1073 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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