20 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEH1	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family. (438 aa)
	GTR1	GTP-binding protein gtr1. (375 aa)
	RTC1	SEA (Seh1-associated) complex subunit. (1316 aa)
	NPR2	Nitrogen permease regulator 2. (436 aa)
	D7B24_001740	FNIP_N domain-containing protein. (1207 aa)
	TSC2	Tuberous sclerosis 2-like protein. (1616 aa)
	D7B24_008299	Uncharacterized protein. (409 aa)
	D7B24_007970	Uncharacterized protein. (784 aa)
	D7B24_007857	Uncharacterized protein. (1616 aa)
	D7B24_007691	WD_REPEATS_REGION domain-containing protein. (1478 aa)
	VAM6	Vacuolar morphoproteinsis protein 6. (1096 aa)
	NPR3	Nitrogen permease regulator 3. (733 aa)
	D7B24_004814	Uncharacterized protein. (207 aa)
	D7B24_003453	Uncharacterized protein. (260 aa)
	D7B24_003452	Protein kinase domain-containing protein. (509 aa)
	D7B24_005838	Zinc_ribbon_16 domain-containing protein. (1049 aa)
	D7B24_006346	RIC1 domain-containing protein. (1109 aa)
	LEU6	2-isopropylmalate synthase. (1178 aa)
	D7B24_008054	UDENN FLCN/SMCR8-type domain-containing protein. (469 aa)
	SEC13	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family. (356 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001740	D7B24_008054	A0A3M9Y0R6	A0A3M9YJ25	FNIP_N domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.622
D7B24_003452	D7B24_005838	A0A3M9YPM7	A0A3M9YEE9	Protein kinase domain-containing protein.	Zinc_ribbon_16 domain-containing protein.	0.643
D7B24_003452	D7B24_007691	A0A3M9YPM7	A0A3M9Y8M3	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.637
D7B24_003452	D7B24_008054	A0A3M9YPM7	A0A3M9YJ25	Protein kinase domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.803
D7B24_003452	D7B24_008299	A0A3M9YPM7	A0A3M9Y5F1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.909
D7B24_003452	GTR1	A0A3M9YPM7	A0A3M9YKE9	Protein kinase domain-containing protein.	GTP-binding protein gtr1.	0.914
D7B24_003452	NPR2	A0A3M9YPM7	A0A3M9XZG4	Protein kinase domain-containing protein.	Nitrogen permease regulator 2.	0.830
D7B24_003452	NPR3	A0A3M9YPM7	A0A3M9YBN1	Protein kinase domain-containing protein.	Nitrogen permease regulator 3.	0.814
D7B24_003452	RTC1	A0A3M9YPM7	A0A3M9YKM6	Protein kinase domain-containing protein.	SEA (Seh1-associated) complex subunit.	0.628
D7B24_003452	SEC13	A0A3M9YPM7	A0A3M9XY10	Protein kinase domain-containing protein.	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.	0.602
D7B24_003452	SEH1	A0A3M9YPM7	A0A3M9YD89	Protein kinase domain-containing protein.	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.	0.605
D7B24_003452	TSC2	A0A3M9YPM7	A0A3M9Y195	Protein kinase domain-containing protein.	Tuberous sclerosis 2-like protein.	0.642
D7B24_003453	D7B24_005838	A0A3M9YLW3	A0A3M9YEE9	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.643
D7B24_003453	D7B24_007691	A0A3M9YLW3	A0A3M9Y8M3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.637
D7B24_003453	D7B24_008054	A0A3M9YLW3	A0A3M9YJ25	Uncharacterized protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.803
D7B24_003453	D7B24_008299	A0A3M9YLW3	A0A3M9Y5F1	Uncharacterized protein.	Uncharacterized protein.	0.909
D7B24_003453	GTR1	A0A3M9YLW3	A0A3M9YKE9	Uncharacterized protein.	GTP-binding protein gtr1.	0.914
D7B24_003453	NPR2	A0A3M9YLW3	A0A3M9XZG4	Uncharacterized protein.	Nitrogen permease regulator 2.	0.830
D7B24_003453	NPR3	A0A3M9YLW3	A0A3M9YBN1	Uncharacterized protein.	Nitrogen permease regulator 3.	0.814
D7B24_003453	RTC1	A0A3M9YLW3	A0A3M9YKM6	Uncharacterized protein.	SEA (Seh1-associated) complex subunit.	0.628