STRINGSTRING
D7B24_003853 D7B24_003853 D7B24_000162 D7B24_000162 D7B24_008152 D7B24_008152 TRIP12 TRIP12 D7B24_004976 D7B24_004976 D7B24_000178 D7B24_000178 USP14 USP14 D7B24_003454 D7B24_003454 D7B24_007492 D7B24_007492 D7B24_001108 D7B24_001108 D7B24_005901 D7B24_005901 SLA2 SLA2 D7B24_009239 D7B24_009239 D7B24_003502 D7B24_003502 SUI1 SUI1 D7B24_002476 D7B24_002476 D7B24_005015 D7B24_005015 ARC19 ARC19 D7B24_007477 D7B24_007477 D7B24_003642 D7B24_003642 D7B24_008155 D7B24_008155 D7B24_008067 D7B24_008067 D7B24_002716 D7B24_002716 D7B24_001434 D7B24_001434 D7B24_001500 D7B24_001500 D7B24_000694 D7B24_000694 D7B24_002446 D7B24_002446 GPA1 GPA1 D7B24_001051 D7B24_001051 SEC61 SEC61 D7B24_004499 D7B24_004499 D7B24_003792 D7B24_003792 D7B24_004469 D7B24_004469 D7B24_004311 D7B24_004311 D7B24_003200 D7B24_003200 D7B24_003793 D7B24_003793 D7B24_005591 D7B24_005591 D7B24_004348 D7B24_004348 D7B24_004733 D7B24_004733 D7B24_004610 D7B24_004610 D7B24_004809 D7B24_004809 D7B24_005166 D7B24_005166 D7B24_005880 D7B24_005880 LETM1 LETM1 D7B24_005485 D7B24_005485 D7B24_006364 D7B24_006364 D7B24_005772 D7B24_005772 ARP3 ARP3 D7B24_005696 D7B24_005696 D7B24_006408 D7B24_006408 D7B24_006311 D7B24_006311 AIP1 AIP1 GNB2L1 GNB2L1 CBP3 CBP3 D7B24_007071 D7B24_007071 RPN11 RPN11 D7B24_007204 D7B24_007204 D7B24_006993 D7B24_006993 D7B24_007158 D7B24_007158 D7B24_008987 D7B24_008987 D7B24_008602 D7B24_008602 GCN1 GCN1 D7B24_007814 D7B24_007814 D7B24_007719 D7B24_007719 D7B24_007820 D7B24_007820 D7B24_009426 D7B24_009426 D7B24_007681 D7B24_007681 MTG2 MTG2 D7B24_007765 D7B24_007765 UBC2 UBC2 NMD3 NMD3 MAD2L1 MAD2L1 TIF6 TIF6 VPS28 VPS28 D7B24_000393 D7B24_000393 SAC6 SAC6 TOR1 TOR1 D7B24_001035 D7B24_001035 MAM33 MAM33 DYN2 DYN2 D7B24_009059 D7B24_009059 D7B24_008956 D7B24_008956 D7B24_001278 D7B24_001278 CDH1 CDH1 D7B24_009525 D7B24_009525 D7B24_009626 D7B24_009626 D7B24_000823 D7B24_000823 D7B24_000834 D7B24_000834 HIR1 HIR1 D7B24_009512 D7B24_009512 D7B24_000960 D7B24_000960 SPT16 SPT16 COT3 COT3 YTM1 YTM1 D7B24_001233 D7B24_001233 D7B24_000392 D7B24_000392 D7B24_000501 D7B24_000501 D7B24_000882 D7B24_000882 D7B24_001731 D7B24_001731 NUO40 NUO40 NOP7 NOP7 CDC20 CDC20 D7B24_001987 D7B24_001987 TWF1 TWF1 D7B24_002216 D7B24_002216 GPA2 GPA2 D7B24_003099 D7B24_003099 D7B24_001745 D7B24_001745 D7B24_001573 D7B24_001573 D7B24_002049 D7B24_002049 D7B24_001778 D7B24_001778 D7B24_001768 D7B24_001768 D7B24_001911 D7B24_001911 D7B24_002031 D7B24_002031 ERB1 ERB1 GUF1 GUF1 D7B24_002908 D7B24_002908 TIF51 TIF51 D7B24_002650 D7B24_002650 EFTUD1 EFTUD1 D7B24_004231 D7B24_004231 D7B24_004086 D7B24_004086 ARP6 ARP6 TUP1 TUP1 EIF4B EIF4B D7B24_004063 D7B24_004063
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D7B24_003853eIF2A domain-containing protein. (718 aa)
D7B24_000162Mago-bind domain-containing protein. (211 aa)
D7B24_008152Uncharacterized protein. (332 aa)
TRIP12Ubiquitin-protein ligase. (1931 aa)
D7B24_004976Uncharacterized protein. (776 aa)
D7B24_000178TUG-UBL1 domain-containing protein. (502 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (569 aa)
D7B24_003454Uncharacterized protein. (661 aa)
D7B24_007492Uncharacterized protein. (523 aa)
D7B24_001108Fungal_trans domain-containing protein. (724 aa)
D7B24_005901Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (319 aa)
SLA2Sla2 Src like adaptor 2. (1026 aa)
D7B24_009239Uncharacterized protein. (475 aa)
D7B24_003502SH3 domain-containing protein. (413 aa)
SUI1Eukaryotic translation initiation factor eIF-1. (115 aa)
D7B24_002476Uncharacterized protein. (357 aa)
D7B24_005015Uncharacterized protein. (132 aa)
ARC19Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. (169 aa)
D7B24_007477Uncharacterized protein. (252 aa)
D7B24_003642Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (568 aa)
D7B24_008155H15 domain-containing protein. (213 aa)
D7B24_008067Amino_oxidase domain-containing protein. (611 aa)
D7B24_002716Uncharacterized protein. (299 aa)
D7B24_001434HRXXH domain-containing protein. (297 aa)
D7B24_001500Uncharacterized protein. (295 aa)
D7B24_000694Uncharacterized protein. (176 aa)
D7B24_002446J domain-containing protein. (444 aa)
GPA1Guanine nucleotide-binding protein subunit alpha. (353 aa)
D7B24_001051C2H2-type domain-containing protein. (701 aa)
SEC61Translocon subunit. (476 aa)
D7B24_004499WLM domain-containing protein. (359 aa)
D7B24_003792NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (198 aa)
D7B24_004469ADF-H domain-containing protein. (146 aa)
D7B24_004311Aldolase_II domain-containing protein. (300 aa)
D7B24_003200SUI1 domain-containing protein. (119 aa)
D7B24_003793Calponin-homology (CH) domain-containing protein. (725 aa)
D7B24_005591Uncharacterized protein. (680 aa)
D7B24_004348COG2 domain-containing protein. (299 aa)
D7B24_004733Uncharacterized protein. (689 aa)
D7B24_004610Uncharacterized protein. (314 aa)
D7B24_004809Uncharacterized protein. (206 aa)
D7B24_005166Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
D7B24_005880HABP4_PAI-RBP1 domain-containing protein. (333 aa)
LETM1Letm1 and EF-hand domain-containing protein 1, mitochondrial. (543 aa)
D7B24_005485Uncharacterized protein. (395 aa)
D7B24_006364ANK_REP_REGION domain-containing protein. (168 aa)
D7B24_005772Uncharacterized protein. (568 aa)
ARP3Actin; Belongs to the actin family. (439 aa)
D7B24_005696Uncharacterized protein. (1694 aa)
D7B24_006408Uncharacterized protein. (296 aa)
D7B24_006311YTH domain-containing protein. (583 aa)
AIP1WD40 repeat-like protein. (610 aa)
GNB2L1Guanine nucleotide-binding protein subunit beta-2-like 1. (316 aa)
CBP3Protein cbp3, mitochondrial. (351 aa)
D7B24_007071Uncharacterized protein. (148 aa)
RPN11Multicatalytic endopeptidase. (336 aa)
D7B24_007204Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (727 aa)
D7B24_006993WH2 domain-containing protein. (307 aa)
D7B24_007158Uncharacterized protein. (313 aa)
D7B24_008987Uncharacterized protein. (215 aa)
D7B24_008602CRIB domain-containing protein. (877 aa)
GCN1Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2838 aa)
D7B24_007814Uncharacterized protein. (1019 aa)
D7B24_007719Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2400 aa)
D7B24_007820Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development. (202 aa)
D7B24_009426Uncharacterized protein. (907 aa)
D7B24_007681SRP54 domain-containing protein. (670 aa)
MTG2Putative GTPase. (608 aa)
D7B24_007765Uncharacterized protein. (1119 aa)
UBC2Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
NMD360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (502 aa)
MAD2L1MAD2 mitotic arrest deficient-like 1. (226 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
VPS28Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (238 aa)
D7B24_000393Uncharacterized protein. (182 aa)
SAC6Fimbrin. (649 aa)
TOR1Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2442 aa)
D7B24_001035Uncharacterized protein. (161 aa)
MAM33Mitochondrial acidic protein mam33. (307 aa)
DYN2Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (100 aa)
D7B24_009059Uncharacterized protein. (265 aa)
D7B24_008956RRF domain-containing protein. (294 aa)
D7B24_001278Uncharacterized protein. (1738 aa)
CDH1Substrate-specific activator of APC-dependent proteolysis. (642 aa)
D7B24_009525Uncharacterized protein. (399 aa)
D7B24_009626WD_REPEATS_REGION domain-containing protein. (479 aa)
D7B24_000823Uncharacterized protein. (209 aa)
D7B24_000834Uncharacterized protein. (638 aa)
HIR1Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1056 aa)
D7B24_009512Ima1_N domain-containing protein. (703 aa)
D7B24_000960S1 motif domain-containing protein. (313 aa)
SPT16FACT complex subunit spt16. (1029 aa)
COT3Elongation factor 2. (950 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (483 aa)
D7B24_001233Uncharacterized protein. (443 aa)
D7B24_000392Uncharacterized protein. (178 aa)
D7B24_000501GRASP55_65 domain-containing protein. (349 aa)
D7B24_000882Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (231 aa)
D7B24_001731Zn(2)-C6 fungal-type domain-containing protein. (781 aa)
NUO40NADH-ubiquinone oxidoreductase 40 kDa subunit. (375 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (665 aa)
CDC20Ubiquitin-protein transferase activating protein. (601 aa)
D7B24_001987Uncharacterized protein. (1956 aa)
TWF1Twinfilin-1. (344 aa)
D7B24_002216Uncharacterized protein. (829 aa)
GPA2Guanine nucleotide-binding protein alpha-2 subunit. (355 aa)
D7B24_003099Uncharacterized protein. (135 aa)
D7B24_001745ADF-H domain-containing protein. (141 aa)
D7B24_001573Uncharacterized protein. (784 aa)
D7B24_002049RING-type domain-containing protein. (1512 aa)
D7B24_001778Uncharacterized protein. (1084 aa)
D7B24_001768Phosducin domain-containing protein. (259 aa)
D7B24_001911Uncharacterized protein. (1168 aa)
D7B24_002031Uncharacterized protein. (854 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (766 aa)
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (1098 aa)
D7B24_002908Uncharacterized protein. (749 aa)
TIF51Eukaryotic translation initiation factor 5A. (161 aa)
D7B24_002650Uncharacterized protein. (732 aa)
EFTUD1Elongation factor-like GTPase 1. (1062 aa)
D7B24_004231Uncharacterized protein. (276 aa)
D7B24_004086WH1 domain-containing protein. (334 aa)
ARP6Actin-protein 6; Belongs to the actin family. (452 aa)
TUP1Proteinral transcription repressor. (626 aa)
EIF4BEukaryotic translation initiation factor 4B. (565 aa)
D7B24_004063DUF2013 domain-containing protein. (490 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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