STRINGSTRING
TUP1 TUP1 D7B24_004516 D7B24_004516 D7B24_003421 D7B24_003421 D7B24_003486 D7B24_003486 D7B24_006824 D7B24_006824 D7B24_003068 D7B24_003068
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TUP1Proteinral transcription repressor. (626 aa)
D7B24_004516Uncharacterized protein. (394 aa)
D7B24_003421Uncharacterized protein. (203 aa)
D7B24_003486WD_REPEATS_REGION domain-containing protein. (639 aa)
D7B24_006824Ubiquitin carboxyl-terminal hydrolase. (746 aa)
D7B24_003068Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (262 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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