STRINGSTRING
HRR25 HRR25 CHS3 CHS3 CDC14 CDC14 RAD30 RAD30 SEC14 SEC14 CDC5 CDC5 D7B24_004987 D7B24_004987 D7B24_005045 D7B24_005045 D7B24_005051 D7B24_005051 D7B24_001046 D7B24_001046 PPP2R5D PPP2R5D MRE11 MRE11 D7B24_003041 D7B24_003041 MSS4 MSS4 D7B24_004684 D7B24_004684 D7B24_005591 D7B24_005591 D7B24_005339 D7B24_005339 YCS4 YCS4 YAP1 YAP1 MSH6 MSH6 HHP1 HHP1 D7B24_005124 D7B24_005124 D7B24_006956 D7B24_006956 D7B24_006440 D7B24_006440 ARP2 ARP2 D7B24_006318 D7B24_006318 D7B24_007026 D7B24_007026 D7B24_006927 D7B24_006927 D7B24_008246 D7B24_008246 TUB4 TUB4 MLH1 MLH1 D7B24_006999 D7B24_006999 SPO14 SPO14 KAR3 KAR3 D7B24_007324 D7B24_007324 D7B24_007076 D7B24_007076 D7B24_007366 D7B24_007366 PDS5B PDS5B D7B24_007182 D7B24_007182 D7B24_008031 D7B24_008031 D7B24_007551 D7B24_007551 D7B24_007640 D7B24_007640 MEC1_1 MEC1_1 UBC2 UBC2 TOP2 TOP2 D7B24_007962 D7B24_007962 RAD1 RAD1 RFA1 RFA1 D7B24_008469 D7B24_008469 DYN2 DYN2 TPS1 TPS1 D7B24_009114 D7B24_009114 RAD51 RAD51 RAD50 RAD50 D7B24_001154 D7B24_001154 D7B24_000996 D7B24_000996 RAD54 RAD54 MSC7 MSC7 D7B24_001285 D7B24_001285 D7B24_001267 D7B24_001267 REC8 REC8 RAD10 RAD10 D7B24_001931 D7B24_001931 D7B24_002347 D7B24_002347 D7B24_002569 D7B24_002569 SKI8 SKI8 D7B24_002852 D7B24_002852 D7B24_003113 D7B24_003113 POL1 POL1 MSH4 MSH4 D7B24_002902 D7B24_002902 D7B24_004517 D7B24_004517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HRR25Serine/threonine protein kinase; Belongs to the protein kinase superfamily. (324 aa)
CHS3Chitin synthase, class 3. (1177 aa)
CDC14Cell division control protein 14. (633 aa)
RAD30DNA-directed DNA polymerase eta rad30. (660 aa)
SEC14S14 cytosolic factor. (360 aa)
CDC5Cell cycle serine/threonine-protein kinase cdc5/MSD2. (1003 aa)
D7B24_004987PH domain-containing protein. (1813 aa)
D7B24_005045Uncharacterized protein. (280 aa)
D7B24_005051Uncharacterized protein. (312 aa)
D7B24_001046Uncharacterized protein. (193 aa)
PPP2R5DSerine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (626 aa)
MRE11Meiotic recombination; Belongs to the MRE11/RAD32 family. (701 aa)
D7B24_003041ERCC4 domain-containing protein. (777 aa)
MSS4Phosphatidylinositol-4-phosphate 5-kinase. (972 aa)
D7B24_004684RING-type domain-containing protein. (373 aa)
D7B24_005591Uncharacterized protein. (680 aa)
D7B24_005339Protein kinase domain-containing protein. (473 aa)
YCS4Condensin complex subunit. (1238 aa)
YAP1DNA-binding transcription factor yap1. (583 aa)
MSH6DNA mismatch repair protein msh6; Component of the post-replicative DNA mismatch repair system (MMR). (1211 aa)
HHP1Casein kinase I; Belongs to the protein kinase superfamily. (393 aa)
D7B24_005124t-SNARE coiled-coil homology domain-containing protein. (333 aa)
D7B24_006956Uncharacterized protein. (337 aa)
D7B24_006440F-box domain-containing protein. (778 aa)
ARP2Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (389 aa)
D7B24_006318DNA_mis_repair domain-containing protein. (590 aa)
D7B24_007026Plus3 domain-containing protein. (607 aa)
D7B24_006927Uncharacterized protein. (500 aa)
D7B24_008246Uncharacterized protein. (1049 aa)
TUB4Gamma-tubulin; Belongs to the tubulin family. (554 aa)
MLH1DNA mismatch repair protein. (704 aa)
D7B24_006999ERCC4 domain-containing protein. (951 aa)
SPO14Phospholipase D1. (1819 aa)
KAR3Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (966 aa)
D7B24_007324Peptidase C50 domain-containing protein. (2172 aa)
D7B24_007076Checkpoint protein; Belongs to the HUS1 family. (339 aa)
D7B24_007366Uncharacterized protein. (381 aa)
PDS5BSister chromatid cohesion protein PDS5 B. (1567 aa)
D7B24_007182Uncharacterized protein. (547 aa)
D7B24_008031Uncharacterized protein. (80 aa)
D7B24_007551Uncharacterized protein. (766 aa)
D7B24_007640Uncharacterized protein. (704 aa)
MEC1_1Serine/threonine-protein kinase M1; Belongs to the PI3/PI4-kinase family. (2248 aa)
UBC2Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
TOP2DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1744 aa)
D7B24_007962Uncharacterized protein. (863 aa)
RAD1SsDNA endodeoxyribonuclease. (326 aa)
RFA1Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (617 aa)
D7B24_008469Csm1 domain-containing protein. (309 aa)
DYN2Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (100 aa)
TPS1Trehalose-6-P synthase/phosphatase complex synthase subunit. (501 aa)
D7B24_009114Uncharacterized protein. (111 aa)
RAD51DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (355 aa)
RAD50DNA repair protein rad50. (1308 aa)
D7B24_001154TIP120 domain-containing protein. (1359 aa)
D7B24_000996Bac_rhamnosid_C domain-containing protein. (1182 aa)
RAD54DNA-dependent ATPase protein rad54. (859 aa)
MSC7Meiotic Sister-Chromatid recombination aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (611 aa)
D7B24_001285Uncharacterized protein. (173 aa)
D7B24_001267Uncharacterized protein. (523 aa)
REC8Meiosis-specific component of sister chromatid cohesion complex. (612 aa)
RAD10SsDNA endonuclease and repair protein rad10. (414 aa)
D7B24_001931RRM domain-containing protein. (657 aa)
D7B24_002347SEC63 domain-containing protein. (387 aa)
D7B24_002569Uncharacterized protein. (393 aa)
SKI8Superkiller. (317 aa)
D7B24_002852Uncharacterized protein. (449 aa)
D7B24_003113Bac_rhamnosid_C domain-containing protein. (702 aa)
POL1DNA polymerase. (1474 aa)
MSH4MutS protein msh4. (269 aa)
D7B24_002902Uncharacterized protein. (578 aa)
D7B24_004517Uncharacterized protein. (393 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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