9 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_001740	FNIP_N domain-containing protein. (1207 aa)
	D7B24_008299	Uncharacterized protein. (409 aa)
	VAM6	Vacuolar morphoproteinsis protein 6. (1096 aa)
	D7B24_007691	WD_REPEATS_REGION domain-containing protein. (1478 aa)
	SEC13	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family. (356 aa)
	SEH1	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family. (438 aa)
	D7B24_005838	Zinc_ribbon_16 domain-containing protein. (1049 aa)
	GTR1	GTP-binding protein gtr1. (375 aa)
	D7B24_008054	UDENN FLCN/SMCR8-type domain-containing protein. (469 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001740	D7B24_008054	A0A3M9Y0R6	A0A3M9YJ25	FNIP_N domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.622
D7B24_005838	D7B24_007691	A0A3M9YEE9	A0A3M9Y8M3	Zinc_ribbon_16 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.997
D7B24_005838	D7B24_008054	A0A3M9YEE9	A0A3M9YJ25	Zinc_ribbon_16 domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.433
D7B24_005838	D7B24_008299	A0A3M9YEE9	A0A3M9Y5F1	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.963
D7B24_005838	GTR1	A0A3M9YEE9	A0A3M9YKE9	Zinc_ribbon_16 domain-containing protein.	GTP-binding protein gtr1.	0.966
D7B24_005838	SEC13	A0A3M9YEE9	A0A3M9XY10	Zinc_ribbon_16 domain-containing protein.	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.	0.995
D7B24_005838	SEH1	A0A3M9YEE9	A0A3M9YD89	Zinc_ribbon_16 domain-containing protein.	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.	0.995
D7B24_005838	VAM6	A0A3M9YEE9	A0A3M9Y9A4	Zinc_ribbon_16 domain-containing protein.	Vacuolar morphoproteinsis protein 6.	0.532
D7B24_007691	D7B24_005838	A0A3M9Y8M3	A0A3M9YEE9	WD_REPEATS_REGION domain-containing protein.	Zinc_ribbon_16 domain-containing protein.	0.997
D7B24_007691	D7B24_008054	A0A3M9Y8M3	A0A3M9YJ25	WD_REPEATS_REGION domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.465
D7B24_007691	D7B24_008299	A0A3M9Y8M3	A0A3M9Y5F1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.772
D7B24_007691	GTR1	A0A3M9Y8M3	A0A3M9YKE9	WD_REPEATS_REGION domain-containing protein.	GTP-binding protein gtr1.	0.813
D7B24_007691	SEC13	A0A3M9Y8M3	A0A3M9XY10	WD_REPEATS_REGION domain-containing protein.	GTPase-activating protein S13; Belongs to the WD repeat SEC13 family.	0.995
D7B24_007691	SEH1	A0A3M9Y8M3	A0A3M9YD89	WD_REPEATS_REGION domain-containing protein.	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.	0.995
D7B24_007691	VAM6	A0A3M9Y8M3	A0A3M9Y9A4	WD_REPEATS_REGION domain-containing protein.	Vacuolar morphoproteinsis protein 6.	0.412
D7B24_008054	D7B24_001740	A0A3M9YJ25	A0A3M9Y0R6	UDENN FLCN/SMCR8-type domain-containing protein.	FNIP_N domain-containing protein.	0.622
D7B24_008054	D7B24_005838	A0A3M9YJ25	A0A3M9YEE9	UDENN FLCN/SMCR8-type domain-containing protein.	Zinc_ribbon_16 domain-containing protein.	0.433
D7B24_008054	D7B24_007691	A0A3M9YJ25	A0A3M9Y8M3	UDENN FLCN/SMCR8-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.465
D7B24_008054	D7B24_008299	A0A3M9YJ25	A0A3M9Y5F1	UDENN FLCN/SMCR8-type domain-containing protein.	Uncharacterized protein.	0.967
D7B24_008054	GTR1	A0A3M9YJ25	A0A3M9YKE9	UDENN FLCN/SMCR8-type domain-containing protein.	GTP-binding protein gtr1.	0.971