3 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APL4	Clathrin associated protein complex large subunit. (837 aa)
	AP1M1	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (430 aa)
	VAS2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1M1	APL4	A0A3M9YE47	A0A3M9Y585	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin associated protein complex large subunit.	0.999
AP1M1	VAS2	A0A3M9YE47	A0A3M9Y5B3	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
APL4	AP1M1	A0A3M9Y585	A0A3M9YE47	Clathrin associated protein complex large subunit.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.999
APL4	VAS2	A0A3M9Y585	A0A3M9Y5B3	Clathrin associated protein complex large subunit.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
VAS2	AP1M1	A0A3M9Y5B3	A0A3M9YE47	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.999
VAS2	APL4	A0A3M9Y5B3	A0A3M9Y585	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin associated protein complex large subunit.	0.999