9 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UTP6	U3 snoRNP protein. (416 aa)
	D7B24_005317	Uncharacterized protein. (231 aa)
	D7B24_005226	Uncharacterized protein. (229 aa)
	D7B24_006839	F-box domain-containing protein. (1173 aa)
	UTP5	Small subunit (SSU) processome component. (433 aa)
	D7B24_002287	WD_REPEATS_REGION domain-containing protein. (905 aa)
	D7B24_003315	Uncharacterized protein. (234 aa)
	D7B24_006002	WD_REPEATS_REGION domain-containing protein. (598 aa)
	WDR3	Dip2/Utp12 protein. (1050 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_002287	D7B24_006002	A0A3M9XZ13	A0A3M9YP65	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
D7B24_002287	UTP5	A0A3M9XZ13	A0A3M9Y471	WD_REPEATS_REGION domain-containing protein.	Small subunit (SSU) processome component.	0.999
D7B24_002287	UTP6	A0A3M9XZ13	A0A3M9YFX7	WD_REPEATS_REGION domain-containing protein.	U3 snoRNP protein.	0.999
D7B24_002287	WDR3	A0A3M9XZ13	A0A3M9YL38	WD_REPEATS_REGION domain-containing protein.	Dip2/Utp12 protein.	0.999
D7B24_003315	D7B24_005317	A0A3M9XXR8	A0A3M9YFU5	Uncharacterized protein.	Uncharacterized protein.	0.525
D7B24_003315	D7B24_006002	A0A3M9XXR8	A0A3M9YP65	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.966
D7B24_003315	UTP5	A0A3M9XXR8	A0A3M9Y471	Uncharacterized protein.	Small subunit (SSU) processome component.	0.965
D7B24_003315	UTP6	A0A3M9XXR8	A0A3M9YFX7	Uncharacterized protein.	U3 snoRNP protein.	0.968
D7B24_003315	WDR3	A0A3M9XXR8	A0A3M9YL38	Uncharacterized protein.	Dip2/Utp12 protein.	0.979
D7B24_005226	D7B24_006002	A0A3M9YD86	A0A3M9YP65	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.966
D7B24_005226	UTP5	A0A3M9YD86	A0A3M9Y471	Uncharacterized protein.	Small subunit (SSU) processome component.	0.965
D7B24_005226	UTP6	A0A3M9YD86	A0A3M9YFX7	Uncharacterized protein.	U3 snoRNP protein.	0.968
D7B24_005226	WDR3	A0A3M9YD86	A0A3M9YL38	Uncharacterized protein.	Dip2/Utp12 protein.	0.979
D7B24_005317	D7B24_003315	A0A3M9YFU5	A0A3M9XXR8	Uncharacterized protein.	Uncharacterized protein.	0.525
D7B24_005317	D7B24_006002	A0A3M9YFU5	A0A3M9YP65	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.966
D7B24_005317	UTP5	A0A3M9YFU5	A0A3M9Y471	Uncharacterized protein.	Small subunit (SSU) processome component.	0.965
D7B24_005317	UTP6	A0A3M9YFU5	A0A3M9YFX7	Uncharacterized protein.	U3 snoRNP protein.	0.968
D7B24_005317	WDR3	A0A3M9YFU5	A0A3M9YL38	Uncharacterized protein.	Dip2/Utp12 protein.	0.979
D7B24_006002	D7B24_002287	A0A3M9YP65	A0A3M9XZ13	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
D7B24_006002	D7B24_003315	A0A3M9YP65	A0A3M9XXR8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.966