12 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TIF51	Eukaryotic translation initiation factor 5A. (161 aa)
	D7B24_002601	Uncharacterized protein. (239 aa)
	RPL2A	60S ribosomal protein L2A. (254 aa)
	D7B24_001233	Uncharacterized protein. (443 aa)
	D7B24_005060	Ribosomal_L14e domain-containing protein. (147 aa)
	RPL26A	60S ribosomal protein L26A. (136 aa)
	SPT5	Transcription elongation factor spt5. (1062 aa)
	D7B24_006350	Ribosomal_L2_C domain-containing protein. (392 aa)
	D7B24_006414	Uncharacterized protein. (135 aa)
	D7B24_005673	Uncharacterized protein. (389 aa)
	D7B24_002679	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	D7B24_004992	Uncharacterized protein. (160 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7B24_001233	D7B24_002601	A0A3M9Y1W6	A0A3M9XXG6	Uncharacterized protein.	Uncharacterized protein.	0.924
D7B24_001233	D7B24_002679	A0A3M9Y1W6	A0A3M9YGW0	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.947
D7B24_001233	D7B24_004992	A0A3M9Y1W6	A0A3M9YKH5	Uncharacterized protein.	Uncharacterized protein.	0.975
D7B24_001233	D7B24_005060	A0A3M9Y1W6	A0A3M9YLP2	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.965
D7B24_001233	D7B24_006350	A0A3M9Y1W6	A0A3M9YB38	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.898
D7B24_001233	D7B24_006414	A0A3M9Y1W6	A0A3M9YC53	Uncharacterized protein.	Uncharacterized protein.	0.908
D7B24_001233	RPL26A	A0A3M9Y1W6	A0A3M9Y6W3	Uncharacterized protein.	60S ribosomal protein L26A.	0.946
D7B24_001233	RPL2A	A0A3M9Y1W6	A0A3M9Y156	Uncharacterized protein.	60S ribosomal protein L2A.	0.942
D7B24_002601	D7B24_001233	A0A3M9XXG6	A0A3M9Y1W6	Uncharacterized protein.	Uncharacterized protein.	0.924
D7B24_002601	D7B24_005673	A0A3M9XXG6	A0A3M9YCV6	Uncharacterized protein.	Uncharacterized protein.	0.533
D7B24_002601	D7B24_006350	A0A3M9XXG6	A0A3M9YB38	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.997
D7B24_002601	RPL26A	A0A3M9XXG6	A0A3M9Y6W3	Uncharacterized protein.	60S ribosomal protein L26A.	0.998
D7B24_002601	RPL2A	A0A3M9XXG6	A0A3M9Y156	Uncharacterized protein.	60S ribosomal protein L2A.	0.984
D7B24_002601	TIF51	A0A3M9XXG6	A0A3M9XXG2	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.924
D7B24_002679	D7B24_001233	A0A3M9YGW0	A0A3M9Y1W6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.947
D7B24_002679	D7B24_004992	A0A3M9YGW0	A0A3M9YKH5	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.999
D7B24_002679	D7B24_005060	A0A3M9YGW0	A0A3M9YLP2	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Ribosomal_L14e domain-containing protein.	0.999
D7B24_002679	D7B24_006350	A0A3M9YGW0	A0A3M9YB38	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Ribosomal_L2_C domain-containing protein.	0.945
D7B24_002679	D7B24_006414	A0A3M9YGW0	A0A3M9YC53	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	Uncharacterized protein.	0.999
D7B24_002679	RPL26A	A0A3M9YGW0	A0A3M9Y6W3	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	60S ribosomal protein L26A.	0.999