77 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCC2	Sister chromatid cohesion protein. (1868 aa)
	D7B24_001715	Uncharacterized protein. (1079 aa)
	D7B24_001355	Protein kinase domain-containing protein. (1007 aa)
	APL5	AP-3 complex subunit delta. (1073 aa)
	IPO5	Importin-5. (1096 aa)
	TEF3	Translational elongation factor EF-1 alpha. (1052 aa)
	VMA13	H(+)-transporting V1 sector ATPase subunit H. (479 aa)
	D7B24_001154	TIP120 domain-containing protein. (1359 aa)
	APL2	Beta-adaptin. (743 aa)
	CSE1L	Exportin-2. (958 aa)
	D7B24_000843	Uncharacterized protein. (1005 aa)
	D7B24_001734	TFCD_C domain-containing protein. (1306 aa)
	SEC26	Coatomer subunit beta. (908 aa)
	D7B24_001587	Importin N-terminal domain-containing protein. (1009 aa)
	VAC8	Vacuolar protein 8. (558 aa)
	D7B24_009548	Importin N-terminal domain-containing protein. (1077 aa)
	D7B24_008607	Cnd3 domain-containing protein. (1042 aa)
	UTP10	SnoRNA-binding rRNA-processing protein utp10. (1809 aa)
	D7B24_008867	Uncharacterized protein. (546 aa)
	TOR1	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2442 aa)
	APL4	Clathrin associated protein complex large subunit. (837 aa)
	RPN2_2	Proteasome regulatory particle base subunit. (1153 aa)
	PPP2R1B	Protein phosphatase 2, regulatory subunit A. (624 aa)
	D7B24_007818	Alpha_adaptinC2 domain-containing protein. (982 aa)
	MEC1_1	Serine/threonine-protein kinase M1; Belongs to the PI3/PI4-kinase family. (2248 aa)
	PSY2	Platinum sensitivity protein. (836 aa)
	XPO1	Exportin-1. (1078 aa)
	GCN1	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2838 aa)
	D7B24_008355	Uncharacterized protein. (1073 aa)
	PDS5B	Sister chromatid cohesion protein PDS5 B. (1567 aa)
	D7B24_006531	Uncharacterized protein. (754 aa)
	D7B24_007079	Uncharacterized protein. (1728 aa)
	D7B24_007006	WD_REPEATS_REGION domain-containing protein. (1485 aa)
	RRP12	Pre-rRNA processing protein. (1321 aa)
	PUF6	Pumilio domain member 6. (708 aa)
	D7B24_006660	Uncharacterized protein. (678 aa)
	RPN1	Proteasome regulatory particle base subunit. (901 aa)
	YCS4	Condensin complex subunit. (1238 aa)
	ANAPC1	Anaphase-promoting complex subunit 1. (1524 aa)
	D7B24_005110	IFRD domain-containing protein. (463 aa)
	LOS1	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1011 aa)
	D7B24_005158	Protein kinase domain-containing protein. (1432 aa)
	D7B24_005628	PUM-HD domain-containing protein. (764 aa)
	VPS15	Serine/threonine-protein kinase. (1543 aa)
	TNPO3	Transportin-3. (966 aa)
	STU1	Suppressor of tub2 mutation. (1110 aa)
	TNPO1	Transportin-1. (942 aa)
	D7B24_003754	Uncharacterized protein. (2078 aa)
	D7B24_005113	Protein kinase domain-containing protein. (772 aa)
	D7B24_004848	Drf_GBD domain-containing protein. (872 aa)
	D7B24_005603	UNC45-central domain-containing protein. (706 aa)
	NOP9	Nucleolar protein 9. (748 aa)
	KAP95	Karyopherin beta. (876 aa)
	USO1	Vesicle-mediated ER to Golgi transport protein. (995 aa)
	UTP20	U3 snoRNP protein. (2640 aa)
	D7B24_003638	Uncharacterized protein. (372 aa)
	D7B24_003199	Uncharacterized protein. (431 aa)
	D7B24_002477	Uncharacterized protein. (771 aa)
	D7B24_002124	PUM-HD domain-containing protein. (1116 aa)
	PPP2R5D	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (626 aa)
	D7B24_000703	Uncharacterized protein. (1100 aa)
	D7B24_004981	Importin N-terminal domain-containing protein. (1052 aa)
	D7B24_000006	DUF3453 domain-containing protein. (719 aa)
	D7B24_005959	ELMO domain-containing protein. (767 aa)
	TRIP12	Ubiquitin-protein ligase. (1931 aa)
	D7B24_005899	SF3b1 domain-containing protein. (1223 aa)
	RCD1	Cell differentiation protein rcd1. (357 aa)
	SEC21	Coatomer subunit gamma. (917 aa)
	D7B24_004045	Uncharacterized protein. (1886 aa)
	D7B24_004524	Uncharacterized protein. (354 aa)
	D7B24_004067	Importin N-terminal domain-containing protein. (1636 aa)
	D7B24_002902	Uncharacterized protein. (578 aa)
	D7B24_002841	Uncharacterized protein. (1193 aa)
	SIL1	Nucleotide exchange factor sil1. (209 aa)
	CTNNBL1	Beta-catenin-like protein 1. (581 aa)
	PUF3	mRNA binding protein puf3. (852 aa)
	LIA1	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor. (333 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC1	PPP2R1B	A0A3M9YD44	A0A3M9Y674	Anaphase-promoting complex subunit 1.	Protein phosphatase 2, regulatory subunit A.	0.422
ANAPC1	RPN2_2	A0A3M9YD44	A0A3M9Y5V4	Anaphase-promoting complex subunit 1.	Proteasome regulatory particle base subunit.	0.631
APL2	APL4	A0A3M9Y1L2	A0A3M9Y585	Beta-adaptin.	Clathrin associated protein complex large subunit.	0.999
APL2	APL5	A0A3M9Y1L2	A0A3M9Y0I9	Beta-adaptin.	AP-3 complex subunit delta.	0.968
APL2	D7B24_007818	A0A3M9Y1L2	A0A3M9Y6A7	Beta-adaptin.	Alpha_adaptinC2 domain-containing protein.	0.959
APL2	SEC21	A0A3M9Y1L2	A0A3M9XWN1	Beta-adaptin.	Coatomer subunit gamma.	0.632
APL4	APL2	A0A3M9Y585	A0A3M9Y1L2	Clathrin associated protein complex large subunit.	Beta-adaptin.	0.999
APL4	APL5	A0A3M9Y585	A0A3M9Y0I9	Clathrin associated protein complex large subunit.	AP-3 complex subunit delta.	0.525
APL4	D7B24_003754	A0A3M9Y585	A0A3M9YEV0	Clathrin associated protein complex large subunit.	Uncharacterized protein.	0.798
APL4	D7B24_007818	A0A3M9Y585	A0A3M9Y6A7	Clathrin associated protein complex large subunit.	Alpha_adaptinC2 domain-containing protein.	0.555
APL4	SEC21	A0A3M9Y585	A0A3M9XWN1	Clathrin associated protein complex large subunit.	Coatomer subunit gamma.	0.471
APL4	SEC26	A0A3M9Y585	A0A3M9Y369	Clathrin associated protein complex large subunit.	Coatomer subunit beta.	0.692
APL4	TRIP12	A0A3M9Y585	A0A3M9YMZ8	Clathrin associated protein complex large subunit.	Ubiquitin-protein ligase.	0.450
APL5	APL2	A0A3M9Y0I9	A0A3M9Y1L2	AP-3 complex subunit delta.	Beta-adaptin.	0.968
APL5	APL4	A0A3M9Y0I9	A0A3M9Y585	AP-3 complex subunit delta.	Clathrin associated protein complex large subunit.	0.525
APL5	D7B24_003754	A0A3M9Y0I9	A0A3M9YEV0	AP-3 complex subunit delta.	Uncharacterized protein.	0.529
APL5	D7B24_007818	A0A3M9Y0I9	A0A3M9Y6A7	AP-3 complex subunit delta.	Alpha_adaptinC2 domain-containing protein.	0.550
APL5	SEC26	A0A3M9Y0I9	A0A3M9Y369	AP-3 complex subunit delta.	Coatomer subunit beta.	0.615
CSE1L	D7B24_000703	A0A3M9Y1V8	A0A3M9YJL3	Exportin-2.	Uncharacterized protein.	0.444
CSE1L	D7B24_004067	A0A3M9Y1V8	A0A3M9XVE1	Exportin-2.	Importin N-terminal domain-containing protein.	0.642