38 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_002297	Uncharacterized protein. (1396 aa)
	D7B24_007209	Uncharacterized protein. (474 aa)
	D7B24_008361	Uncharacterized protein. (7576 aa)
	GSP1	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (218 aa)
	JIP5	WD repeat-containing protein jip5. (431 aa)
	D7B24_008513	Uncharacterized protein. (1388 aa)
	VPS24	Vacuolar protein-sorting-associated protein 24. (264 aa)
	SEH1	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family. (438 aa)
	UBC9	E2 SUMO-conjugating protein ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	D7B24_005609	Uncharacterized protein. (638 aa)
	D7B24_003785	Nup188_C domain-containing protein. (1826 aa)
	KAP95	Karyopherin beta. (876 aa)
	TUB1_2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	D7B24_008688	Uncharacterized protein. (671 aa)
	D7B24_009220	Uncharacterized protein. (222 aa)
	D7B24_008125	ELYS domain-containing protein. (303 aa)
	CHMP2A	Charged multivesicular body protein 2A. (201 aa)
	D7B24_008657	Uncharacterized protein. (489 aa)
	SRC1	Inner nuclear membrane protein enriched at telomere/subtelomere region. (693 aa)
	TUB1_1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (454 aa)
	D7B24_001642	Uncharacterized protein. (1665 aa)
	D7B24_002930	Uncharacterized protein. (695 aa)
	D7B24_003405	Uncharacterized protein. (303 aa)
	VPS4	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (430 aa)
	NIC96	Nuclear pore complex subunit. (1179 aa)
	D7B24_000849	AAA domain-containing protein; Belongs to the AAA ATPase family. (262 aa)
	D7B24_009383	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (855 aa)
	D7B24_009382	Ubiquitin-like domain-containing protein. (98 aa)
	CHMP4C	Charged multivesicular body protein 4C. (223 aa)
	D7B24_001235	Uncharacterized protein. (1014 aa)
	D7B24_000574	Uncharacterized protein. (1201 aa)
	D7B24_002032	Uncharacterized protein. (504 aa)
	D7B24_002002	Uncharacterized protein. (849 aa)
	CHMP6	Charged multivesicular body protein 6. (198 aa)
	D7B24_001181	Peptidase S59 domain-containing protein. (1960 aa)
	D7B24_002234	Uncharacterized protein. (420 aa)
	TUB2	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	ERG24	Erg24, C-14 sterol reductase. (491 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP2A	CHMP4C	A0A3M9YJA0	A0A3M9Y3A8	Charged multivesicular body protein 2A.	Charged multivesicular body protein 4C.	0.999
CHMP2A	CHMP6	A0A3M9YJA0	A0A3M9Y192	Charged multivesicular body protein 2A.	Charged multivesicular body protein 6.	0.998
CHMP2A	D7B24_000849	A0A3M9YJA0	A0A3M9Y1Q1	Charged multivesicular body protein 2A.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.703
CHMP2A	D7B24_003405	A0A3M9YJA0	A0A3M9XWS4	Charged multivesicular body protein 2A.	Uncharacterized protein.	0.926
CHMP2A	D7B24_007209	A0A3M9YJA0	A0A3M9Y7M3	Charged multivesicular body protein 2A.	Uncharacterized protein.	0.871
CHMP2A	D7B24_009220	A0A3M9YJA0	A0A3M9YID8	Charged multivesicular body protein 2A.	Uncharacterized protein.	0.727
CHMP2A	SRC1	A0A3M9YJA0	A0A3M9YKL2	Charged multivesicular body protein 2A.	Inner nuclear membrane protein enriched at telomere/subtelomere region.	0.533
CHMP2A	VPS24	A0A3M9YJA0	A0A3M9YCS8	Charged multivesicular body protein 2A.	Vacuolar protein-sorting-associated protein 24.	0.999
CHMP2A	VPS4	A0A3M9YJA0	A0A3M9Y494	Charged multivesicular body protein 2A.	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	0.988
CHMP4C	CHMP2A	A0A3M9Y3A8	A0A3M9YJA0	Charged multivesicular body protein 4C.	Charged multivesicular body protein 2A.	0.999
CHMP4C	CHMP6	A0A3M9Y3A8	A0A3M9Y192	Charged multivesicular body protein 4C.	Charged multivesicular body protein 6.	0.999
CHMP4C	D7B24_000849	A0A3M9Y3A8	A0A3M9Y1Q1	Charged multivesicular body protein 4C.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.647
CHMP4C	D7B24_002930	A0A3M9Y3A8	A0A3M9XY88	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.636
CHMP4C	D7B24_003405	A0A3M9Y3A8	A0A3M9XWS4	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.969
CHMP4C	D7B24_007209	A0A3M9Y3A8	A0A3M9Y7M3	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.975
CHMP4C	D7B24_009220	A0A3M9Y3A8	A0A3M9YID8	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.686
CHMP4C	SRC1	A0A3M9Y3A8	A0A3M9YKL2	Charged multivesicular body protein 4C.	Inner nuclear membrane protein enriched at telomere/subtelomere region.	0.754
CHMP4C	TUB1_1	A0A3M9Y3A8	A0A3M9YMF4	Charged multivesicular body protein 4C.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.640
CHMP4C	TUB1_2	A0A3M9Y3A8	A0A3M9YH07	Charged multivesicular body protein 4C.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.640
CHMP4C	TUB2	A0A3M9Y3A8	A0A3M9XYA9	Charged multivesicular body protein 4C.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.636