STRINGSTRING
GAP1 GAP1 D7B24_001727 D7B24_001727 ACT1 ACT1 ARP9 ARP9 CDC42 CDC42 D7B24_005696 D7B24_005696 RAC1 RAC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAP1Glyceraldehyde-3-phosphate dehydrogenase 1. (752 aa)
D7B24_001727CAP-Gly domain-containing protein. (239 aa)
ACT1Actin. (375 aa)
ARP9Actin-like protein arp9 (SWI/SNF complex component arp9); Belongs to the actin family. (923 aa)
CDC42Rho GTPase. (193 aa)
D7B24_005696Uncharacterized protein. (1694 aa)
RAC1Rho GTPase protein rac1. (200 aa)
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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