19 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7B24_005852	PUA domain-containing protein. (465 aa)
	D7B24_008007	Aminotran_1_2 domain-containing protein. (394 aa)
	D7B24_007552	Aldedh domain-containing protein. (458 aa)
	D7B24_009505	Aminotran_1_2 domain-containing protein. (453 aa)
	AAT1	Aspartate aminotransferase. (423 aa)
	D7B24_000659	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (483 aa)
	D7B24_008721	Uncharacterized protein. (465 aa)
	GDH2	NAD-dependent glutamate dehydrogenase. (1082 aa)
	D7B24_001522	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (455 aa)
	D7B24_004139	Uncharacterized protein. (742 aa)
	CAR2	Ornithine aminotransferase. (444 aa)
	D7B24_003976	Uncharacterized protein. (606 aa)
	D7B24_005140	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (871 aa)
	D7B24_003146	Uncharacterized protein. (435 aa)
	D7B24_003147	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (285 aa)
	D7B24_002296	Uncharacterized protein. (286 aa)
	D7B24_001601	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (452 aa)
	GLN1	Glutamine synthetase. (362 aa)
	D7B24_001602	Uncharacterized protein. (1385 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAT1	D7B24_001601	A0A3M9YLB0	A0A3M9Y0K5	Aspartate aminotransferase.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.939
AAT1	D7B24_001602	A0A3M9YLB0	A0A3M9Y163	Aspartate aminotransferase.	Uncharacterized protein.	0.814
AAT1	D7B24_003146	A0A3M9YLB0	A0A3M9XX99	Aspartate aminotransferase.	Uncharacterized protein.	0.492
AAT1	D7B24_003147	A0A3M9YLB0	A0A3M9XXY2	Aspartate aminotransferase.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.492
AAT1	D7B24_003976	A0A3M9YLB0	A0A3M9YEC0	Aspartate aminotransferase.	Uncharacterized protein.	0.492
AAT1	D7B24_004139	A0A3M9YLB0	A0A3M9YF31	Aspartate aminotransferase.	Uncharacterized protein.	0.492
AAT1	D7B24_008007	A0A3M9YLB0	A0A3M9Y9R7	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.726
AAT1	D7B24_009505	A0A3M9YLB0	A0A3M9Y3P2	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.731
AAT1	GDH2	A0A3M9YLB0	A0A3M9YGU0	Aspartate aminotransferase.	NAD-dependent glutamate dehydrogenase.	0.964
AAT1	GLN1	A0A3M9YLB0	A0A3M9Y0P6	Aspartate aminotransferase.	Glutamine synthetase.	0.444
CAR2	D7B24_001601	A0A3M9YER5	A0A3M9Y0K5	Ornithine aminotransferase.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.632
CAR2	D7B24_001602	A0A3M9YER5	A0A3M9Y163	Ornithine aminotransferase.	Uncharacterized protein.	0.632
CAR2	D7B24_003146	A0A3M9YER5	A0A3M9XX99	Ornithine aminotransferase.	Uncharacterized protein.	0.540
CAR2	D7B24_003147	A0A3M9YER5	A0A3M9XXY2	Ornithine aminotransferase.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.540
CAR2	D7B24_003976	A0A3M9YER5	A0A3M9YEC0	Ornithine aminotransferase.	Uncharacterized protein.	0.439
CAR2	D7B24_004139	A0A3M9YER5	A0A3M9YF31	Ornithine aminotransferase.	Uncharacterized protein.	0.640
CAR2	D7B24_005852	A0A3M9YER5	A0A3M9YAV2	Ornithine aminotransferase.	PUA domain-containing protein.	0.964
CAR2	D7B24_007552	A0A3M9YER5	A0A3M9Y9Q2	Ornithine aminotransferase.	Aldedh domain-containing protein.	0.844
CAR2	GDH2	A0A3M9YER5	A0A3M9YGU0	Ornithine aminotransferase.	NAD-dependent glutamate dehydrogenase.	0.632
CAR2	GLN1	A0A3M9YER5	A0A3M9Y0P6	Ornithine aminotransferase.	Glutamine synthetase.	0.456