39 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VMA3	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (161 aa)
	VPH1	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (867 aa)
	VMA16	H(+)-transporting V0 sector ATPase subunit c; Belongs to the V-ATPase proteolipid subunit family. (200 aa)
	D7B24_004814	Uncharacterized protein. (207 aa)
	D7B24_005838	Zinc_ribbon_16 domain-containing protein. (1049 aa)
	SEH1	Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family. (438 aa)
	LST8	TOR complex subunit lst8. (318 aa)
	NPR3	Nitrogen permease regulator 3. (733 aa)
	VMA7	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (123 aa)
	D7B24_007006	WD_REPEATS_REGION domain-containing protein. (1485 aa)
	VMA8	H(+)-transporting V1 sector ATPase subunit D. (258 aa)
	VMA11	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (155 aa)
	D7B24_007691	WD_REPEATS_REGION domain-containing protein. (1478 aa)
	D7B24_006879	Uncharacterized protein. (515 aa)
	VMA2	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (506 aa)
	VMA9	H(+)-transporting V0 sector ATPase subunit e. (90 aa)
	GCN1	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (2838 aa)
	VMA1	H(+)-transporting V1 sector ATPase subunit A. (607 aa)
	D7B24_009099	RWD domain-containing protein. (300 aa)
	D7B24_007857	Uncharacterized protein. (1616 aa)
	D7B24_009386	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (393 aa)
	D7B24_008299	Uncharacterized protein. (409 aa)
	D7B24_009097	Methyltranfer_dom domain-containing protein. (635 aa)
	TOR1	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2442 aa)
	VMA13	H(+)-transporting V1 sector ATPase subunit H. (479 aa)
	D7B24_001260	Amidohydro-rel domain-containing protein. (353 aa)
	VMA4	V-ATPase V1 sector subunit E. (229 aa)
	IML1	Vacuolar membrane-associated protein iml1. (1917 aa)
	VMA10	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (115 aa)
	NPR2	Nitrogen permease regulator 2. (436 aa)
	ATP6V0C	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (232 aa)
	D7B24_003287	Uncharacterized protein. (323 aa)
	VMA6	H(+)-transporting V0 sector ATPase subunit d. (365 aa)
	D7B24_008054	UDENN FLCN/SMCR8-type domain-containing protein. (469 aa)
	D7B24_002728	Uncharacterized protein. (1207 aa)
	GTR1	GTP-binding protein gtr1. (375 aa)
	RTC1	SEA (Seh1-associated) complex subunit. (1316 aa)
	D7B24_003453	Uncharacterized protein. (260 aa)
	D7B24_003452	Protein kinase domain-containing protein. (509 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V0C	D7B24_001260	A0A3M9XX55	A0A3M9Y1C9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Amidohydro-rel domain-containing protein.	0.862
ATP6V0C	D7B24_003287	A0A3M9XX55	A0A3M9YFL6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.707
ATP6V0C	D7B24_003452	A0A3M9XX55	A0A3M9YPM7	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Protein kinase domain-containing protein.	0.495
ATP6V0C	D7B24_003453	A0A3M9XX55	A0A3M9YLW3	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.495
ATP6V0C	D7B24_004814	A0A3M9XX55	A0A3M9YEL9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.495
ATP6V0C	D7B24_006879	A0A3M9XX55	A0A3M9Y8C6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Uncharacterized protein.	0.604
ATP6V0C	D7B24_007006	A0A3M9XX55	A0A3M9Y9K7	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	WD_REPEATS_REGION domain-containing protein.	0.619
ATP6V0C	D7B24_009386	A0A3M9XX55	A0A3M9Y5U0	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.978
ATP6V0C	GTR1	A0A3M9XX55	A0A3M9YKE9	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	GTP-binding protein gtr1.	0.655
ATP6V0C	LST8	A0A3M9XX55	A0A3M9YC99	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	TOR complex subunit lst8.	0.619
ATP6V0C	NPR3	A0A3M9XX55	A0A3M9YBN1	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Nitrogen permease regulator 3.	0.613
ATP6V0C	TOR1	A0A3M9XX55	A0A3M9Y576	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.621
ATP6V0C	VMA1	A0A3M9XX55	A0A3M9Y733	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	H(+)-transporting V1 sector ATPase subunit A.	0.994
ATP6V0C	VMA10	A0A3M9XX55	A0A3M9XZG5	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.974
ATP6V0C	VMA11	A0A3M9XX55	A0A3M9Y8N0	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.964
ATP6V0C	VMA13	A0A3M9XX55	A0A3M9Y1G4	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	H(+)-transporting V1 sector ATPase subunit H.	0.978
ATP6V0C	VMA16	A0A3M9XX55	A0A3M9YER7	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	H(+)-transporting V0 sector ATPase subunit c; Belongs to the V-ATPase proteolipid subunit family.	0.993
ATP6V0C	VMA2	A0A3M9XX55	A0A3M9Y7P2	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.993
ATP6V0C	VMA4	A0A3M9XX55	A0A3M9Y0V6	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-ATPase V1 sector subunit E.	0.991
ATP6V0C	VMA6	A0A3M9XX55	A0A3M9YHP8	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	H(+)-transporting V0 sector ATPase subunit d.	0.994