113 items (Verticillium nonalfalfae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS13	Ribosomal 40S subunit protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	D7B24_006058	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
	D7B24_006640	Uncharacterized protein. (456 aa)
	RPL28	60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	D7B24_006414	Uncharacterized protein. (135 aa)
	D7B24_005588	Uncharacterized protein. (128 aa)
	D7B24_005166	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	RPS28A_1	40S ribosomal protein S28. (68 aa)
	RPS8A	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (207 aa)
	D7B24_005720	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	RPS15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (203 aa)
	RPS20	40S ribosomal protein S20. (116 aa)
	D7B24_005089	Myb-like domain-containing protein. (559 aa)
	RPL24	60S ribosomal protein L24. (175 aa)
	RPS23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (141 aa)
	D7B24_003561	Uncharacterized protein. (387 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	D7B24_000158	Uncharacterized protein. (418 aa)
	RPL37A	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPP2B	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	D7B24_005060	Ribosomal_L14e domain-containing protein. (147 aa)
	D7B24_005023	Epimerase domain-containing protein. (393 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
	RPS4	40S ribosomal protein S4. (275 aa)
	D7B24_004992	Uncharacterized protein. (160 aa)
	D7B24_005045	Uncharacterized protein. (280 aa)
	RPS9	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
	D7B24_008161	Uncharacterized protein. (444 aa)
	RPL32	60S ribosomal protein L32. (131 aa)
	D7B24_002484	SGNH_hydro domain-containing protein. (293 aa)
	RPL11	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
	RPS18	Ribosomal 40S subunit protein S18B. (228 aa)
	D7B24_004832	Methyltransf_33 domain-containing protein. (356 aa)
	GRE2	Methylglyoxal reductase (NADPH-dependent) gre2. (345 aa)
	D7B24_002679	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	D7B24_003942	Uncharacterized protein. (400 aa)
	D7B24_005532	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (128 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	RPS6	40S ribosomal protein S6. (257 aa)
	D7B24_004750	Uncharacterized protein. (253 aa)
	D7B24_003697	FAD-binding PCMH-type domain-containing protein. (610 aa)
	D7B24_004034	S10_plectin domain-containing protein. (167 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	D7B24_003314	Epimerase domain-containing protein. (353 aa)
	D7B24_003156	MIF4G domain-containing protein. (1536 aa)
	D7B24_003149	Epimerase domain-containing protein. (85 aa)
	RPL35B	60S ribosomal protein L35B. (109 aa)
	D7B24_002292	S4 RNA-binding domain-containing protein. (211 aa)
	D7B24_001965	Uncharacterized protein. (795 aa)
	CBC2	Nuclear cap-binding protein subunit 2. (186 aa)
	D7B24_002816	Epimerase domain-containing protein. (369 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (337 aa)
	RPL35	60S ribosomal protein L35. (125 aa)
	D7B24_003398	Epimerase domain-containing protein. (599 aa)
	RPS16	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	COX16	Cytochrome oxidase assembly. (113 aa)
	RPL7	60S ribosomal protein L7. (262 aa)
	RPL2A	60S ribosomal protein L2A. (254 aa)
	D7B24_001039	Epimerase domain-containing protein. (340 aa)
	RPL9B	60S ribosomal protein L9B. (193 aa)
	SUP45	ERF1. (536 aa)
	D7B24_001884	Uncharacterized protein. (219 aa)
	RPL8B	60S ribosomal protein L8B. (261 aa)
	RPS27	40S ribosomal protein S27. (238 aa)
	D7B24_001031	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (119 aa)
	D7B24_002065	Uncharacterized protein. (332 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	D7B24_009395	Epimerase domain-containing protein. (347 aa)
	RPS14	Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	PAB1	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (767 aa)
	RPL25	60S ribosomal protein L25. (157 aa)
	RPS28A_2	40S ribosomal protein S28. (68 aa)
	RPL22	60S ribosomal protein L22. (126 aa)
	RPS2	40S ribosomal protein; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	RPP0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	RPL31	60S ribosomal protein L31. (154 aa)
	D7B24_009153	Uncharacterized protein. (347 aa)
	D7B24_009112	Uncharacterized protein. (910 aa)
	D7B24_008613	Ribosomal_L28e domain-containing protein. (158 aa)
	D7B24_008333	Ribosomal_L18e/L15P domain-containing protein. (195 aa)
	D7B24_007994	Epimerase domain-containing protein. (491 aa)
	D7B24_009396	Uncharacterized protein. (256 aa)
	RPL26A	60S ribosomal protein L26A. (136 aa)
	RPL34	60S ribosomal protein L34. (116 aa)
	D7B24_009111	Ribos_L4_asso_C domain-containing protein. (352 aa)
	RPL20	60S ribosomal protein L20. (174 aa)
	SUP35	Translation termination factor GTPase eRF3. (674 aa)
	D7B24_007346	Epimerase domain-containing protein. (343 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	RPS3	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
	RPL39	60S ribosomal protein L39. (51 aa)
	RPL17	60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (185 aa)
	D7B24_006963	Uncharacterized protein. (535 aa)
	RPL44	40s ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	D7B24_008005	Uncharacterized protein. (162 aa)
	RPL10A	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	D7B24_006635	Uncharacterized protein. (476 aa)
	D7B24_006906	Uncharacterized protein. (277 aa)
	RPS17	40S ribosomal protein S17. (148 aa)
	RPL16B	60S ribosomal protein L16B; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	RPL30	60S ribosomal protein L30. (110 aa)
	EGT1	Ergothioneine biosynthesis protein 1. (873 aa)
	RPL5	60S ribosomal protein L5. (299 aa)
	cnxG	Molybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (95 aa)
	RPL3	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (391 aa)
	D7B24_005721	Uncharacterized protein. (303 aa)
	RPS19	40S ribosomal protein S19. (152 aa)
	D7B24_006890	Uncharacterized protein. (321 aa)
	RPL13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (214 aa)
	RPS5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (212 aa)

Your Current Organism:

Verticillium nonalfalfae

NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBC2	COX16	A0A3M9XYW4	A0A3M9Y0X2	Nuclear cap-binding protein subunit 2.	Cytochrome oxidase assembly.	0.524
CBC2	D7B24_000158	A0A3M9XYW4	A0A3M9YMU4	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.858
CBC2	D7B24_001031	A0A3M9XYW4	A0A3M9Y293	Nuclear cap-binding protein subunit 2.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.538
CBC2	D7B24_001965	A0A3M9XYW4	A0A3M9XYR2	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.999
CBC2	D7B24_002679	A0A3M9XYW4	A0A3M9YGW0	Nuclear cap-binding protein subunit 2.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.621
CBC2	D7B24_003156	A0A3M9XYW4	A0A3M9XX83	Nuclear cap-binding protein subunit 2.	MIF4G domain-containing protein.	0.858
CBC2	D7B24_003697	A0A3M9XYW4	A0A3M9XVW2	Nuclear cap-binding protein subunit 2.	FAD-binding PCMH-type domain-containing protein.	0.629
CBC2	D7B24_005045	A0A3M9XYW4	A0A3M9YK45	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.453
CBC2	D7B24_005060	A0A3M9XYW4	A0A3M9YLP2	Nuclear cap-binding protein subunit 2.	Ribosomal_L14e domain-containing protein.	0.637
CBC2	D7B24_005089	A0A3M9XYW4	A0A3M9YPI8	Nuclear cap-binding protein subunit 2.	Myb-like domain-containing protein.	0.697
CBC2	D7B24_005532	A0A3M9XYW4	A0A3M9YFJ3	Nuclear cap-binding protein subunit 2.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.557
CBC2	D7B24_005588	A0A3M9XYW4	A0A3M9YCC7	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.575
CBC2	D7B24_005720	A0A3M9XYW4	A0A3M9YDI0	Nuclear cap-binding protein subunit 2.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.695
CBC2	D7B24_005721	A0A3M9XYW4	A0A3M9YB09	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.695
CBC2	D7B24_006414	A0A3M9XYW4	A0A3M9YC53	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.629
CBC2	D7B24_006890	A0A3M9XYW4	A0A3M9YB52	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.524
CBC2	D7B24_006906	A0A3M9XYW4	A0A3M9Y8W3	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.524
CBC2	D7B24_006963	A0A3M9XYW4	A0A3M9Y895	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.705
CBC2	D7B24_008005	A0A3M9XYW4	A0A3M9Y8F9	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.617
CBC2	D7B24_009153	A0A3M9XYW4	A0A3M9Y3W3	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.487